HHsearch results for GI: 254780773 and protein with PDBid: 1ujd_A

>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1

Probab=98.21  E-value=9.1e-07  Score=64.91  Aligned_cols=57  Identities=18%  Similarity=0.405  Sum_probs=49.2

Q ss_pred             CCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCC--CHHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf             2000245675565300-14566288887830454--0011111014678863169996587
Q gi|254780773|r  120 PVVSNVSPASPAAIAG-VKKGDCIISLDGITVSA--FEEVAPYVRENPLHEISLVLYREHV  177 (349)
Q Consensus       120 p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s--~~dl~~~i~~~~g~~v~i~v~R~~~  177 (349)
                      .+|..|.++|||+++| |++||+|++|||+++..  .+|+.+.+++.+ .++++++.|+..
T Consensus        51 i~I~~v~~gg~A~~~G~l~~GD~Il~VNg~~v~~~t~~ev~~~i~~~~-~~v~L~v~r~~~  110 (117)
T 1ujd_A           51 AYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQQS-GEAEICVRLDLN  110 (117)
T ss_dssp             EEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSCCS-SCEEEEEESSCC
T ss_pred             EEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CEEEEEEEECCC
T ss_conf             899998999948984999999999999999978997999999998399-959999997999