HHsearch results for GI: 254780773 and protein with PDBid: 1vae_A
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.55 E-value=4e-08 Score=74.24 Aligned_cols=61 Identities=25% Similarity=0.368 Sum_probs=52.9
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECC
Q ss_conf 33332000245675565300145662888878304540--01111101467886316999658
Q gi|254780773|r 116 GVMKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREH 176 (349)
Q Consensus 116 g~~~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~ 176 (349)
+....+|..|.++|||++|||++||+|++|||+++..+ +|+.+.++..+++.+++++.|..
T Consensus 34 g~~~v~V~~v~~gs~A~~aGL~~GD~Il~INg~~v~~~~~~ev~~~l~~~~~~~v~l~v~~~~ 96 (111)
T 1vae_A 34 GNTPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSLL 96 (111)
T ss_dssp SSSSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECEE
T ss_pred CCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCEEEEEEECCC
T ss_conf 999989999799997898499889999999999989998999999987689986899997877