HHsearch results for GI: 254780773 and protein with PDBid: 1vb7_A

>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1

Probab=98.37  E-value=2.9e-07  Score=68.30  Aligned_cols=58  Identities=22%  Similarity=0.364  Sum_probs=50.1

Q ss_pred             CCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCH--HHHHHCCCCCCCCCEEEEEECCC
Q ss_conf             320002456755653001456628888783045400--11111014678863169996587
Q gi|254780773|r  119 KPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFE--EVAPYVRENPLHEISLVLYREHV  177 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~--dl~~~i~~~~g~~v~i~v~R~~~  177 (349)
                      ..+|..+.++|||+++||++||+|++|||+++.++.  +..+.++. .++++++++.|++.
T Consensus        31 ~~~V~~v~~~s~A~~~~L~~GD~Il~INg~~v~~~t~~~~~~li~~-~~~~v~L~V~R~~~   90 (94)
T 1vb7_A           31 PIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQ-SASPLRLQLDRSSG   90 (94)
T ss_dssp             EEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSSEEEEEECCCC
T ss_pred             CEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHC-CCCEEEEEEEECCC
T ss_conf             9699998587978977999999999899999999999999999877-99839999998998