HHsearch results for GI: 254780773 and protein with PDBid: 1wif_A

>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1

Probab=98.38  E-value=2.5e-07  Score=68.74  Aligned_cols=60  Identities=20%  Similarity=0.259  Sum_probs=52.6

Q ss_pred             CCCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCC--CHHHHHHCCCC-CCCCCEEEEEECCCC
Q ss_conf             32000245675565300-14566288887830454--00111110146-788631699965873
Q gi|254780773|r  119 KPVVSNVSPASPAAIAG-VKKGDCIISLDGITVSA--FEEVAPYVREN-PLHEISLVLYREHVG  178 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s--~~dl~~~i~~~-~g~~v~i~v~R~~~~  178 (349)
                      ..+|.+|.|++||+++| |++||+|++|||+.+..  .+|+.+.++.. ++..+++++.|+...
T Consensus        50 ~i~V~~v~~~g~A~~~G~l~~GD~Il~INg~~v~~~~~~ev~~~lk~~~~g~~v~L~v~R~~~~  113 (126)
T 1wif_A           50 YLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRGFLE  113 (126)
T ss_dssp             EEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESSSSC
T ss_pred             CEEEEEECCCCHHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEECCCC
T ss_conf             5899998999979980999989999999999978998999999996799999899999949978