HHsearch results for GI: 254780773 and protein with PDBid: 1x6d_A

>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.05  E-value=2.6e-06  Score=61.78  Aligned_cols=57  Identities=19%  Similarity=0.360  Sum_probs=45.4

Q ss_pred             CCCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEEC
Q ss_conf             32000245675565300-145662888878304540--0111110146788631699965
Q gi|254780773|r  119 KPVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYRE  175 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~  175 (349)
                      ..+|.+|.++|||+++| |++||+|++|||+++.++  +|..+.++..+.....+.+.|.
T Consensus        43 ~i~I~~V~~gs~A~~~g~l~~GD~Il~VNg~~v~~~s~~~v~~~lr~~~~~~~l~v~~~~  102 (119)
T 1x6d_A           43 VITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRK  102 (119)
T ss_dssp             SCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEEC
T ss_pred             CEEEEEECCCCCHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCEEEEEEEEC
T ss_conf             889999879987765099889999999999987799799999999738997699999827