HHsearch results for GI: 254780773 and protein with PDBid: 2h2b_A
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesion; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A
Probab=98.00 E-value=3.9e-06 Score=60.56 Aligned_cols=58 Identities=17% Similarity=0.333 Sum_probs=48.6
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCC--CHHHHHHCCCCCCCCCEEEEEECCCC
Q ss_conf 3200024567556530014566288887830454--00111110146788631699965873
Q gi|254780773|r 119 KPVVSNVSPASPAAIAGVKKGDCIISLDGITVSA--FEEVAPYVRENPLHEISLVLYREHVG 178 (349)
Q Consensus 119 ~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s--~~dl~~~i~~~~g~~v~i~v~R~~~~ 178 (349)
...|..|.++|||+ ++|++||+|++|||+++.+ .+|..+.++++ ++.+++++.|....
T Consensus 40 ~i~I~~v~~gs~a~-~~l~~GD~Il~INg~~v~~~s~~e~~~llr~~-~~~v~L~V~R~~~~ 99 (107)
T 2h2b_A 40 SIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKS-GKNAKITIRRKKGG 99 (107)
T ss_dssp CEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEEESCC
T ss_pred CEEEEEECCCCHHH-CCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEECCCC
T ss_conf 88999978899778-38998999999999999999899999999828-99799999973789