HHsearch results for GI: 254780773 and protein with PDBid: 2iwq_A

>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- virus interaction, structural genomics consortium, synaptosome; 1.80A {Homo sapiens}

Probab=98.27  E-value=4.8e-07  Score=66.82  Aligned_cols=56  Identities=23%  Similarity=0.377  Sum_probs=47.8

Q ss_pred             CCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECC
Q ss_conf             2000245675565300-145662888878304540--01111101467886316999658
Q gi|254780773|r  120 PVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREH  176 (349)
Q Consensus       120 p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~  176 (349)
                      -.|.+|.|+|||+++| |++||+|++|||+++.++  +|..+.+++. ++++++++.|.-
T Consensus        61 i~I~~V~~~s~A~~~G~L~~GD~Il~INg~~v~~~s~~e~~~~l~~~-~~~v~l~V~r~~  119 (123)
T 2iwq_A           61 IFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA-GNPVVFMVQSII  119 (123)
T ss_dssp             EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC-CSSEEEEEECCC
T ss_pred             EEEEEECCCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC-CCEEEEEEEECC
T ss_conf             89999899981787289989999999999998899999999999859-996999999677