HHsearch results for GI: 254780773 and protein with PDBid: 2joa_A
>2joa_A Serine protease HTRA1; PDZ, beta-sandwich, cyclically-permuted, protein binding; NMR {Homo sapiens}
Probab=99.13 E-value=2.9e-11 Score=95.92 Aligned_cols=67 Identities=25% Similarity=0.468 Sum_probs=59.6
Q ss_pred CCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCC
Q ss_conf 2000245675565300145662888878304540011111014678863169996587313101121100
Q gi|254780773|r 120 PVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRENPLHEISLVLYREHVGVLHLKVMPRLQ 189 (349)
Q Consensus 120 p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~dl~~~i~~~~g~~v~i~v~R~~~~~~~~~v~p~~~ 189 (349)
.+|.+|.|+|||++|||++||+|++|||++|++++|+.+.++ +++++++++.|+++ ..+++++|+..
T Consensus 37 v~V~~V~~~spA~~aGL~~GDvI~~ing~~V~~~~~~~~~i~--~~~~v~l~v~R~g~-~~~l~v~p~~~ 103 (105)
T 2joa_A 37 AYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIK--RESTLNMVVRRGNE-DIMITVIPEEI 103 (105)
T ss_dssp EEEEEECSSSHHHHHTCCTTCEECBCSSCBCCSHHHHHHHHH--HCSSEEEEEEETTE-EEEEEECCBCC
T ss_pred EEEEEECCCCHHHHCCCCCCEEEEEECCEECCCHHHHHHHHH--CCCEEEEEEEECCE-EEEEEEEECCC
T ss_conf 899997999969986999981999999999789999999971--89969999999999-99999995567