HHsearch results for GI: 254780773 and protein with PDBid: 2kjd_A

>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}

Probab=98.39  E-value=1.7e-07  Score=69.84  Aligned_cols=58  Identities=22%  Similarity=0.426  Sum_probs=48.9

Q ss_pred             CCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf             32000245675565300145662888878304540--011111014678863169996587
Q gi|254780773|r  119 KPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHV  177 (349)
Q Consensus       119 ~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~  177 (349)
                      ..+|..|.++|||++|||++||+|++|||+++.++  +++.+.++. +++.+++++.|.+.
T Consensus        34 gi~V~~V~~gspA~~agL~~GD~Il~VNg~~v~~~~~~e~v~~l~~-~~~~v~L~V~~~~~   93 (128)
T 2kjd_A           34 GQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRA-GGDETKLLVVDRET   93 (128)
T ss_dssp             SEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEEEEECHHH
T ss_pred             CEEEEEECCCCHHHHCCCCCCCEEEEECCEEECCCCHHHHHHHHHC-CCCEEEEEEECCCC
T ss_conf             9899998998989986999899999979999678999999999976-98979999986786