HHsearch results for GI: 254780773 and protein with PDBid: 2pzd_A

>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptide-binding module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4

Probab=99.18  E-value=1.5e-11  Score=97.84  Aligned_cols=71  Identities=27%  Similarity=0.389  Sum_probs=62.5

Q ss_pred             CCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCC
Q ss_conf             20002456755653001456628888783045400111110146788631699965873131011211005654
Q gi|254780773|r  120 PVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRENPLHEISLVLYREHVGVLHLKVMPRLQDTVD  193 (349)
Q Consensus       120 p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~~dl~~~i~~~~g~~v~i~v~R~~~~~~~~~v~p~~~~~~~  193 (349)
                      .+|.+|.++|||++|||++||+|++|||++|.+++|+.+.++  +++++++++.|+++ ..+++++|+..+..+
T Consensus        37 v~V~~V~~~spA~~aGL~~GDvI~~ing~~V~~~~~l~~~l~--~~~~i~l~v~R~g~-~~~~~v~p~~~~~~g  107 (113)
T 2pzd_A           37 VLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVR--TQSQLAVQIRRGRE-TLTLYVTPEVTEGGG  107 (113)
T ss_dssp             EEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH--HCSSEEEEEEETTE-EEEEEECCEEC---C
T ss_pred             EEEEEECCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHC--CCCEEEEEEEECCE-EEEEEEEEEEECCCC
T ss_conf             899998999989985999887999999999689999999866--99879999999999-999999983746982