HHsearch results for GI: 254780773 and protein with PDBid: 2qt5_A

>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}

Probab=98.48  E-value=1.1e-07  Score=71.12  Aligned_cols=57  Identities=28%  Similarity=0.482  Sum_probs=49.7

Q ss_pred             CCCCCCCCCCHHHHHH-CCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCC
Q ss_conf             2000245675565300-145662888878304540--011111014678863169996587
Q gi|254780773|r  120 PVVSNVSPASPAAIAG-VKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHV  177 (349)
Q Consensus       120 p~I~~V~~~spA~~AG-L~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~  177 (349)
                      .+|.+|.|+|||+++| |++||+|++|||+++.++  +|+.+.+++.+ +++++++.|+..
T Consensus       137 v~V~~V~~~s~A~~~G~L~~GD~Il~VNg~~v~~~s~~e~~~~lk~~~-~~v~L~V~Rd~~  196 (200)
T 2qt5_A          137 VVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQCG-QEATLLIEYDVS  196 (200)
T ss_dssp             EEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTC-SEEEEEEEEEEE
T ss_pred             EEEEECCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHCC-CEEEEEEEECCC
T ss_conf             899966699856733899999899989998989998999999998389-978999997997