HHsearch results for GI: 254780773 and protein with PDBid: 2v90_A
>2v90_A PDZ domain-containing protein 3; alternative splicing, membrane, cytoplasm, protein-binding; 2.00A {Homo sapiens}
Probab=98.50 E-value=7.2e-08 Score=72.49 Aligned_cols=61 Identities=23% Similarity=0.349 Sum_probs=50.5
Q ss_pred CCCCCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCCCCCCCEEEEEECCCCE
Q ss_conf 332000245675565300145662888878304540--01111101467886316999658731
Q gi|254780773|r 118 MKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYREHVGV 179 (349)
Q Consensus 118 ~~p~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~~g~~v~i~v~R~~~~~ 179 (349)
....|..|.++|||++|||++||+|++|||+++.+. ++..+.++. +++.+++++.|++.+.
T Consensus 30 ~~~~V~~V~~gspA~~aGL~~GD~Il~Ing~~v~~~s~~~v~~~l~~-~~~~v~L~v~r~~~~~ 92 (96)
T 2v90_A 30 PGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQG-QGSCVSLTVVDPEADR 92 (96)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEECCCTTS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHC-CCCEEEEEEECCCCCE
T ss_conf 89999997999989986999899999999999899999999999877-9897999998799772