HHsearch results for GI: 254780773 and protein with PDBid: 3b4r_A
>3b4r_A Putative zinc metalloprotease MJ0392; intramembrane protease, CBS domain, hydrolase, metal-binding, transmembrane; 3.30A {Methanocaldococcus jannaschii}
Probab=99.80 E-value=7.7e-19 Score=148.20 Aligned_cols=71 Identities=25% Similarity=0.535 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCHHEEEEECCCEEEEEEEEEECCEEECCCCCCCHHHHCCCCCCC
Q ss_conf 99999999999973377999998497500455306831127860598079999771121110012445506650368421
Q gi|254780773|r 9 LYTVSLIIIVVIHEFGHYMVARLCNIRVLSFSVGFGPELIGITSRSGVRWKVSLIPLGGYVSFSEDEKDMRSFFCAAPWK 88 (349)
Q Consensus 9 ~~~~~l~~~v~iHE~GH~~~Ar~~gv~V~~FsiGfgp~l~~~~~k~~t~y~i~~~PlGgyV~~~~~e~~~~~f~~~~~~~ 88 (349)
...+.+.+.+++||+||+++||++|+++++ +..+|+||+.++.+ .++++
T Consensus 42 ~~~l~l~~sv~~HE~gH~~~a~~~G~~~~~---------------------i~l~pfGg~~~~~~----------~~~~~ 90 (224)
T 3b4r_A 42 VLFILLFVSVVLHELGHSYVAKKYGVKIEK---------------------ILLLPIGGVAMMDK----------IPKEG 90 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCC---------------------EEECSSSCBCCCCC----------CCSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCC---------------------EEEEECHHHHCCCC----------CCCCC
T ss_conf 999999999999999999999997995374---------------------77761112424656----------78400
Q ss_pred CHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 0134211233321122111011
Q gi|254780773|r 89 KILTVLAGPLANCVMAILFFTF 110 (349)
Q Consensus 89 R~~i~~AGp~~N~ilA~iif~~ 110 (349)
|+.|.+|||++|+++|.+.+..
T Consensus 91 ~~~ialAGPl~n~~la~~~~~~ 112 (224)
T 3b4r_A 91 ELRIGIAGPLVSFIIGIVLLIV 112 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHH
T ss_conf 3245532208899999999987