HHsearch results for GI: 254780773 and protein with PDBid: 3bpu_A

>3bpu_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; zinc, structural genomics consortium, SGC, alternative splicing; 1.60A {Homo sapiens}

Probab=97.77  E-value=1.6e-05  Score=56.31  Aligned_cols=54  Identities=24%  Similarity=0.402  Sum_probs=43.1

Q ss_pred             CCCCCCCCCHHHHHHCCCCCEEEEECCCCCCCC--HHHHHHCCCC-CCCCCEEEEEECC
Q ss_conf             000245675565300145662888878304540--0111110146-7886316999658
Q gi|254780773|r  121 VVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVREN-PLHEISLVLYREH  176 (349)
Q Consensus       121 ~I~~V~~~spA~~AGL~~GD~Il~InG~~V~s~--~dl~~~i~~~-~g~~v~i~v~R~~  176 (349)
                      ++..+.+  +|+.+||++||+|++|||+++..+  +++.+.+++. +++++++++.|+.
T Consensus        30 ~v~~v~~--~~a~~~l~~GD~Il~INg~~v~~~~~~e~v~~ir~~~~~~~v~l~V~R~~   86 (88)
T 3bpu_A           30 RVKQIVD--SPRSRGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT   86 (88)
T ss_dssp             EEEECCC----CCTTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred             EEEECCC--HHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCCCCCEEEEEEEECC
T ss_conf             9986379--38984999899999999999789989999999973999899999999789