RPSBLAST alignment for GI: 254780773 and conserved domain: smart00228
>gnl|CDD|128524 smart00228, PDZ, Domain present in PSD-95, Dlg, and ZO-1/2. Also called DHR (Dlg homologous region) or GLGF (relatively well conserved tetrapeptide in these domains). Some PDZs have been shown to bind C-terminal polypeptides; others appear to bind internal (non-C-terminal) polypeptides. Different PDZs possess different binding specificities. Length = 85
Score = 45.4 bits (108), Expect = 2e-05
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 121 VVSNVSPASPAAIAGVKKGDCIISLDGITVSAF--EEVAPYVRENPLHEISLVLYRE 175
VVS+V P SPAA AG+K GD I+ ++G +V E +++ +++L + R
Sbjct: 29 VVSSVVPGSPAAKAGLKVGDVILEVNGTSVEGLTHLEAVDLLKKAG-GKVTLTVLRG 84