RPSBLAST alignment for GI: 254780773 and conserved domain: TIGR00054
>gnl|CDD|161683 TIGR00054, TIGR00054, RIP metalloprotease RseP. A model that detects fragments as well matches a number of members of the PEPTIDASE FAMILY S2C. The region of match appears not to overlap the active site domain. Length = 420
Score = 121 bits (305), Expect = 3e-28
Identities = 76/228 (33%), Positives = 116/228 (50%), Gaps = 12/228 (5%)
Query: 120 PVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRENPLHEISLVLYREHVGV 179
PV+S+V+P SPA AG+K+GD I S++G + ++ + V+ENP + + + R
Sbjct: 205 PVLSDVTPNSPAEKAGLKEGDYIQSINGEKLRSWTDFVSAVKENPGKSMDIKVERNG-ET 263
Query: 180 LHLKVMPRLQDTVDRFGIKRQVPSVGISFSYDETKLHSRTVLQSFSRGLDEISSITRGFL 239
L + + P + + +GIS S S +L +F++G I + L
Sbjct: 264 LSISLTPEAKGKI----------GIGISPSL-APLEVSYGILNAFAKGASATVDIVKLIL 312
Query: 240 GVLSSAFGKDTRLNQISGPVGIARIAKNFFDHGFNAYIAFLAMFSWAIGFMNLLPIPILD 299
L +L +SGPVGI + A + + G + F A S +G MNLLPIP LD
Sbjct: 313 TNLGKLITGSFKLKNLSGPVGIVKGAGSSANSGIVYLLQFGAFLSINLGIMNLLPIPALD 372
Query: 300 GGHLITFLLEMIRGKSLGVSVTRVITRMGLCIILFLFFLGIRNDIYGL 347
GG L+ +E IRGK L V + R+G+ +LFL LG+ ND+ L
Sbjct: 373 GGQLLFLFIEAIRGKPLPEKVQAFVYRIGVAFLLFLMGLGLFNDLLRL 420