RPSBLAST alignment of GI: 254780773 and protein with PDBid: 1fc6
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A Length = 388
Score = 43.6 bits (102), Expect = 7e-05
Identities = 16/70 (22%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 108 FTFFFYNTGVMKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSA--FEEVAPYVRENPL 165
+ VV +P PA AG + GD I+++DG V +V+ ++
Sbjct: 89 LEITYDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEAD 148
Query: 166 HEISLVLYRE 175
++ +VL+
Sbjct: 149 SQVEVVLHAP 158