RPSBLAST alignment of GI: 254780773 and protein with PDBid: 2eei
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 106
Score = 38.4 bits (89), Expect = 0.003
Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 13/90 (14%)
Query: 116 GVMKPVVSNVSPASPAAIAGVKKGDCIISLDGITVSAFEEVAPYVRENPLHEISLVLYRE 175
G +++++P A AGV D +I ++G V E+ HE + ++
Sbjct: 30 GKKGVYMTDITPQGVAMRAGVLADDHLIEVNGENV-----------EDASHEEVVEKVKK 78
Query: 176 HVGVLHLKVMPRLQDTVDRFGIKRQVPSVG 205
+ ++ + +T R ++ PS G
Sbjct: 79 SGSRVMFLLVDK--ETDKRHVEQKSGPSSG 106