RPSBLAST alignment of GI: 254780773 and protein with PDBid: 2i4s

>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5 Length = 105

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 122 VSNVSPASPAAIAGVKKGDCIISLDGITV-SAFEEVAPYVRENPLHEISLVLYRE 175
           VS           G++ GD  ++L+G+ +         +   N + E+SL + R+
Sbjct: 41  VSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERD 95