HHsearch alignment for GI: 254780774 and conserved domain: COG1836

>COG1836 Predicted membrane protein [Function unknown].
Probab=96.51  E-value=0.073  Score=31.73  Aligned_cols=118  Identities=15%  Similarity=0.064  Sum_probs=70.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCC----H----HCCCCCCHHHHHHH
Q ss_conf             9999999999999999999606666969999999-9999961067630010234530----0----00285402447889
Q gi|254780774|r  104 WRALGVVYSGLPSIALSSLRGDDAKGCVIVFFVL-SVVWATDIFAYFIGRFVGGPKI----A----PKISPRKTWSGSIG  174 (269)
Q Consensus       104 ~~~~~~~yi~~~~~~l~~l~~~~~~g~~~il~ll-~~v~~~D~~AY~~G~~~Gk~kl----~----p~ISP~KT~EG~ig  174 (269)
T Consensus        94 ~NV~gn~l~~~l~av~~~~~~~~-~~~~~~~~~~SvAta~aDT~ASEiG~~~~~~p~lITtfkrV~~Gt~GaVS~~GelA  172 (247)
T COG1836          94 ENVLGNGLAALLFAVLYAIYPDP-QLWFLGGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVSLVGELA  172 (247)
T ss_pred             HHHHHCCHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHH
T ss_conf             88763109999999999947770-67999999999999862478888767617982899864676899888312354699


Q ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             98999998864210146656430135766788999887799999987479985
Q gi|254780774|r  175 GLFCGVGVGVALLSFFCANCFELALAVSILLSVSCQLGDLFESYIKRYFGIKQ  227 (269)
Q Consensus       175 G~i~s~i~~~~~~~~~~~~~~~~~i~l~~~~~i~~~~GDL~eS~iKR~~~vKD  227 (269)
T Consensus       173 av~Ga~iIal~~~l~~-~~----~~~~v~~vtlaGf~G~~iDSllGAtle~kg  220 (247)
T COG1836         173 AVAGAFIIALLSYLVG-YI----SLGGVLSVTLAGFAGTNIDSLLGATLERKG  220 (247)
T ss_pred             HHHHHHHHHHHHHHHH-HC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_conf             9988899999999997-31----344157887898876308888647777502