HHsearch alignment for GI: 254780774 and conserved domain: COG1836
>COG1836 Predicted membrane protein [Function unknown].
Probab=96.51 E-value=0.073 Score=31.73 Aligned_cols=118 Identities=15% Similarity=0.064 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCC----H----HCCCCCCHHHHHHH
Q ss_conf 9999999999999999999606666969999999-9999961067630010234530----0----00285402447889
Q gi|254780774|r 104 WRALGVVYSGLPSIALSSLRGDDAKGCVIVFFVL-SVVWATDIFAYFIGRFVGGPKI----A----PKISPRKTWSGSIG 174 (269)
Q Consensus 104 ~~~~~~~yi~~~~~~l~~l~~~~~~g~~~il~ll-~~v~~~D~~AY~~G~~~Gk~kl----~----p~ISP~KT~EG~ig 174 (269)
T Consensus 94 ~NV~gn~l~~~l~av~~~~~~~~-~~~~~~~~~~SvAta~aDT~ASEiG~~~~~~p~lITtfkrV~~Gt~GaVS~~GelA 172 (247)
T COG1836 94 ENVLGNGLAALLFAVLYAIYPDP-QLWFLGGFAASVATANADTLASEIGKAYGKRPRLITTFKRVEPGTSGAVSLVGELA 172 (247)
T ss_pred HHHHHCCHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCHHHHHH
T ss_conf 88763109999999999947770-67999999999999862478888767617982899864676899888312354699
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 98999998864210146656430135766788999887799999987479985
Q gi|254780774|r 175 GLFCGVGVGVALLSFFCANCFELALAVSILLSVSCQLGDLFESYIKRYFGIKQ 227 (269)
Q Consensus 175 G~i~s~i~~~~~~~~~~~~~~~~~i~l~~~~~i~~~~GDL~eS~iKR~~~vKD 227 (269)
T Consensus 173 av~Ga~iIal~~~l~~-~~----~~~~v~~vtlaGf~G~~iDSllGAtle~kg 220 (247)
T COG1836 173 AVAGAFIIALLSYLVG-YI----SLGGVLSVTLAGFAGTNIDSLLGATLERKG 220 (247)
T ss_pred HHHHHHHHHHHHHHHH-HC----CCCHHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_conf 9988899999999997-31----344157887898876308888647777502