HHsearch alignment for GI: 254780774 and conserved domain: pfam01148
>pfam01148 CTP_transf_1 Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.
Probab=100.00 E-value=0 Score=437.43 Aligned_cols=251 Identities=31% Similarity=0.484 Sum_probs=193.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHH-
Q ss_conf 5799999999999999998533999999999999999999998322344206999999999999875201215789999-
Q gi|254780774|r 6 KWRIVTGLVMACSFILISWIGGIWFRLWTMVMSLCIYYEWKIITGSVSLSLSEKILGLFTFFLVFFMIITGFFKSAFFL- 84 (269)
Q Consensus 6 ~~Riita~il~~i~~~~l~~g~~~~~i~i~ii~~l~~~E~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~- 84 (269)
T Consensus 1 k~Riitalili~l~l~~l~~g~~~f~~l~~~i~~l~~~E~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (259)
T pfam01148 1 KQRIITHIVLILIFLILLFLGPLIFLLLVAAIIILALYELIRLLRLKFSSRLLLLTRGLGLIFYLLGLLLVYGEGLLALF 80 (259)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 91899999999999999999899999999999999999999998402420499999999999999999998899999999
Q ss_pred -HHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf -999999999-999---510135899999999999999999996066669699999999999961067630010234530
Q gi|254780774|r 85 -LMLYSFIDW-MIS---IMKNRAFWRALGVVYSGLPSIALSSLRGDDAKGCVIVFFVLSVVWATDIFAYFIGRFVGGPKI 159 (269)
Q Consensus 85 -~~~~~~~~~-~~~---~~~~~~~~~~~~~~yi~~~~~~l~~l~~~~~~g~~~il~ll~~v~~~D~~AY~~G~~~Gk~kl 159 (269)
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~il~~i~~v~~~Dt~AYf~G~~fGk~Kl 158 (259)
T pfam01148 81 GLVLLVIPVLWLLVLPVLAYHRVSSTLLPLFYVGLFLSLLL--ITNPFFGLLWALLLILVVWASDIGAYFVGKAFGKHKL 158 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999644589999999999999999999999--8554465999999999999976799999999189888
Q ss_pred HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
Q ss_conf 0002854024478899899999886421014665-643013576678899988779999998747998544879987716
Q gi|254780774|r 160 APKISPRKTWSGSIGGLFCGVGVGVALLSFFCAN-CFELALAVSILLSVSCQLGDLFESYIKRYFGIKQSGWLLPGHGGV 238 (269)
Q Consensus 160 ~p~ISP~KT~EG~igG~i~s~i~~~~~~~~~~~~-~~~~~i~l~~~~~i~~~~GDL~eS~iKR~~~vKDsg~llpGHGGi 238 (269)
T Consensus 159 ~P~ISPnKT~EG~igG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDL~eS~~KR~~~vKDsg~llPGHGG~ 238 (259)
T pfam01148 159 APKISPNKTWEGFLGGFVAAVLVGLLFSLLLGPYPSPLHALLLGLLASLVGQFGDLVESGFKRDFGIKDSGKLIPGHGGI 238 (259)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 85469997236689999999999999999972224899999999999999986099999998805999777877875407
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q ss_conf 76264799999999999999
Q gi|254780774|r 239 MDRVDGLVFSCFLMSAISFF 258 (269)
Q Consensus 239 lDR~Ds~l~~~p~~~~~~~f 258 (269)
T Consensus 239 LDR~Dsll~~~P~~y~~~~~ 258 (259)
T pfam01148 239 LDRLDSLLFAAPIFYAFLYI 258 (259)
T ss_pred HHHHHHHHHHHHHHHHHHHH
T ss_conf 88786799999999999996