HHsearch alignment for GI: 254780775 and conserved domain: PRK10240
>PRK10240 undecaprenyl pyrophosphate synthase; Provisional.
Probab=100.00 E-value=0 Score=612.13 Aligned_cols=224 Identities=38% Similarity=0.708 Sum_probs=221.8
Q ss_pred CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 48851899975998779899999999999999997698689997202336532301248888988863100001000028
Q gi|254780775|r 18 MDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLIKSFLKKGFYSLKKNN 97 (243)
Q Consensus 18 mDGNrRwAk~~gl~~~~Gh~~G~~~l~~ii~~~~~~gI~~lTvyafS~eN~~R~~~Ev~~L~~l~~~~l~~~~~~~~~~~ 97 (243)
T Consensus 1 MDGNrRWAk~~gl~~~~GH~~G~~~l~~iv~~~~~~gI~~lTlyaFStENw~R~~~EV~~Lm~L~~~~l~~~~~~l~~~~ 80 (229)
T PRK10240 1 MDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRHN 80 (229)
T ss_pred CCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98638999887998789999999999999999998699989999608766499979999999999999999999999879
Q ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
Q ss_conf 32631387445100002358999874202543115897248815789987787643676489687781155310113367
Q gi|254780775|r 98 IKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCSHDVDSSLIAKYLDTS 177 (243)
Q Consensus 98 iki~~iGd~~~lp~~i~~~i~~~e~~T~~n~~~~Lnia~~Yggr~EI~~A~k~l~~~~~~~~~~~~~I~~~~i~~~L~~~ 177 (243)
T Consensus 81 iri~~iGd~~~Lp~~l~~~i~~~e~~T~~n~~~~Lnia~~Yggr~EI~~A~~~i~~~~~~~~~~~~~i~~~~~~~~l~~~ 160 (229)
T PRK10240 81 VRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMH 160 (229)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHCCCCC
T ss_conf 48999644100675899999999997455886289997378877999999999999998378991331788876314667
Q ss_pred CCCCCCEEEECCCCEECCCCCCCHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 8776526994578521336564011355388636878888989999999998630050588465
Q gi|254780775|r 178 DVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGLSK 241 (243)
Q Consensus 178 ~~p~pDLlIRTsGe~RLSnFllwq~~ysEl~F~~~lWPdf~~~dl~~~i~~y~~r~RrfG~~~~ 241 (243)
T Consensus 161 ~~p~pDLlIRTsGe~RLSnFLLwQ~ayaEl~F~~~lWPdF~~~dl~~al~~y~~R~RrfGg~~~ 224 (229)
T PRK10240 161 ELAPVDLVIRTGGEHRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFGGTEP 224 (229)
T ss_pred CCCCCCEEEECCCCEECCCHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 8999675885488631243133223450488778888779999999999998543476899999