HHsearch results for GI: 254780775 and protein with PDBid: 1f75_A

>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=100.00  E-value=0  Score=613.53  Aligned_cols=237  Identities=43%  Similarity=0.790  Sum_probs=233.0

Q ss_pred             HHHCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf             35206898826999848851899975998779899999999999999997698689997202336532301248888988
Q gi|254780775|r    3 ASMMSSSPPDHIGIIMDGNGRWAAARGLPRCAGHRKGIEVFNEIVAAAAEVGIKNLTIFAFSINNWRRPVSEISELVKLI   82 (243)
Q Consensus         3 ~~~~~~~~P~HIaiImDGNrRwAk~~gl~~~~Gh~~G~~~l~~ii~~~~~~gI~~lTvyafS~eN~~R~~~Ev~~L~~l~   82 (243)
                      ..+.++++|+|||||||||||||+++|++..+||++|++++.++++||.++||++||+||||+|||+||++||++||+++
T Consensus        13 ~~~~~~~iP~HIA~ImDGNrRwAk~~g~~~~~Gh~~G~~~l~~i~~~c~~~gI~~vTvyafS~eN~~R~~~Ev~~l~~l~   92 (249)
T 1f75_A           13 NNINAAQIPKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVRKITRYASDLGVKYLTLYAFSTENWSRPKDEVNYLMKLP   92 (249)
T ss_dssp             -CCCSTTSCSEEEEEECCHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEC------------CGGGTHH
T ss_pred             CCCCCCCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
T ss_conf             45785679988999642868999987997788999999999999999997698589987415423479889999999999


Q ss_pred             HHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf             86310000100002832631387445100002358999874202543115897248815789987787643676489687
Q gi|254780775|r   83 KSFLKKGFYSLKKNNIKVRVIGNRLSLDDDILCVLKEAEDQTRLNTGLNLFIAFNYSSRDEISRAIKNIFQDIESGSVCS  162 (243)
Q Consensus        83 ~~~l~~~~~~~~~~~iki~~iGd~~~lp~~i~~~i~~~e~~T~~n~~~~Lnia~~Yggr~EI~~A~k~l~~~~~~~~~~~  162 (243)
                      ..++.+..+.+.+++++++++|+++.||+++++.+.++++.|+++++++||||++||||+||++|++++++++..+.+.+
T Consensus        93 ~~~~~~~~~~~~~~~i~i~~iG~~~~lp~~l~~~i~~~e~~T~~n~~~~lnia~~YgGr~EI~~A~~~~~~~~~~~~~~~  172 (249)
T 1f75_A           93 GDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGLTLVFALNYGGRKEIISAVQLIAERYKSGEISL  172 (249)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEESCGGGSCHHHHHHHHHHHHTTTTCCSCEEEEECSCCHHHHHHHHHHHHHHHHHTTSSCG
T ss_pred             HHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99789889999970763012322344777888888999998346997079998445665899999999999875056650


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCEEEECCCCEECCCCCCCHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             78115531011336787765269945785213365640113553886368788889899999999986300505884
Q gi|254780775|r  163 HDVDSSLIAKYLDTSDVPDPDLIIRTGGEKRLSDFLLWQVAYSEFVFIPEYWPDFSRELFFHALNQYNLRDRRFGGL  239 (243)
Q Consensus       163 ~~I~~~~i~~~L~~~~~p~pDLlIRTsGe~RLSnFllwq~~ysEl~F~~~lWPdf~~~dl~~~i~~y~~r~RrfG~~  239 (243)
                      ++|+++.|.++|++++.||||||||||||+|||||||||++||||||++++||||+..||.+||.+||+|+|||||+
T Consensus       173 ~~I~~~~i~~~L~~~~~pdpDLlIRTsGe~RLSnFLlwQ~~ytEl~F~~~~WPdf~~~dl~~ai~~y~~r~RrfG~~  249 (249)
T 1f75_A          173 DEISETHFNEYLFTANMPDPELLIRTSGEERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRHRRFGGL  249 (249)
T ss_dssp             GGCSHHHHGGGSTTTTSCCCSEEEECTTCCBCCSCSTTTTTTCEEEECCSCGGGCCHHHHHHHHHHHTTC-------
T ss_pred             HHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
T ss_conf             02279999985689998998878863886300221455231154786678887699999999999998666878899