HHsearch alignment of GI: 254780776 and MMDB domain: 1eh1_A_1-35_106-185

>1eh1_A (A:1-35,A:106-185) Ribosome recycling factor; translation, hinge variability; 2.60A {Thermus thermophilus}
Probab=99.89  E-value=5.5e-22  Score=171.49  Aligned_cols=109  Identities=39%  Similarity=0.596  Sum_probs=103.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCC
Q ss_conf             89999999999999999975313888896782450788558642399876512057838989965967899999996317
Q gi|254780776|r    7 LQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVERGIHES   86 (186)
Q Consensus         7 l~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~kAI~~s   86 (186)
                      +.+..+.|+++++.+...++++||||++                                                    
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------------   34 (115)
T 1eh1_A            7 YAETRSHMQKSLEVLEHNLAGLRTGRAN----------------------------------------------------   34 (115)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTSCCSSCC----------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHCCCCC----------------------------------------------------
T ss_conf             9999999999999999999765227899----------------------------------------------------


Q ss_pred             CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             88998454773478861555689999999999998889999999999999999998753589997899888999999999
Q gi|254780776|r   87 NLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLENDIQKITD  166 (186)
Q Consensus        87 ~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~iq~lt~  166 (186)
                                        |||+|+|++++|.||+.+|+||++||||||++++.||++++++++|||+.++++++||++||
T Consensus        35 ------------------~lTeErRkeLvK~aKk~~EeaKvsIRnIRrda~~~iKk~kK~~~iSEDd~k~~ekeIQkLTD   96 (115)
T 1eh1_A           35 ------------------PLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITD   96 (115)
T ss_dssp             ------------------SCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH
T ss_pred             ------------------HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             ------------------79999999999999999999999999999999999860014589986789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999988744
Q gi|254780776|r  167 STIKNIDSFFEEKKKEIMH  185 (186)
Q Consensus       167 ~~~~~id~~~~~Kekell~  185 (186)
                      +|+++||++++.||+|||.
T Consensus        97 kyi~kID~l~k~KEKEIL~  115 (115)
T 1eh1_A           97 EFIAKADQLAEKKEQEILG  115 (115)
T ss_dssp             HHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999998658