HHsearch alignment of GI: 254780776 and MMDB domain: 1ise_A_1-32_105-185
>1ise_A (A:1-32,A:105-185) Ribosome recycling factor; translation; 2.20A {Escherichia coli}
Probab=99.90 E-value=1.2e-22 Score=176.06 Aligned_cols=112 Identities=35% Similarity=0.558 Sum_probs=107.2
Q ss_pred CCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
Q ss_conf 94200789999999999999999975313888896782450788558642399876512057838989965967899999
Q gi|254780776|r 1 MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE 80 (186)
Q Consensus 1 ~~e~~dl~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~ 80 (186)
+++|+ .+++.+|.++++.|...|++||||||
T Consensus 2 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------- 32 (113)
T 1ise_A 2 ISDIR--KDAEVRMDKCVEAFKTQISKIRTGRA----------------------------------------------- 32 (113)
T ss_dssp CHHHH--HHHHHHHHHHHHHHHHHHTTSCCSSC-----------------------------------------------
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHCCCC-----------------------------------------------
T ss_conf 58999--99999999999999999987731899-----------------------------------------------
Q ss_pred HHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 99631788998454773478861555689999999999998889999999999999999998753589997899888999
Q gi|254780776|r 81 RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND 160 (186)
Q Consensus 81 kAI~~s~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~ 160 (186)
||+|+|++++|.|++.+|+||++|||+||++++.||++++.+++|||+.++++++
T Consensus 33 -------------------------LTeErRkeLvK~aKk~~E~aKvsIRnIRrda~k~iKk~~K~~~isEDd~k~~eke 87 (113)
T 1ise_A 33 -------------------------LTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDKEISEDDDRRSQDD 87 (113)
T ss_dssp -------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHH
T ss_pred -------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_conf -------------------------7899999999999999999999999999999999998761389986688889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999999887449
Q gi|254780776|r 161 IQKITDSTIKNIDSFFEEKKKEIMHF 186 (186)
Q Consensus 161 iq~lt~~~~~~id~~~~~Kekell~~ 186 (186)
||++||+|++++|.+++.||+|||++
T Consensus 88 IQkltdk~i~~id~l~~~KEKEIl~V 113 (113)
T 1ise_A 88 VQKLTDAAIKKIEAALADKEAELMQF 113 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999997479