HHsearch alignment of GI: 254780776 and MMDB domain: 1wih_A_
>1wih_A (A:) Mitochondrial ribosome recycling factor; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus}
Probab=99.92 E-value=3.4e-26 Score=200.27 Aligned_cols=82 Identities=32% Similarity=0.545 Sum_probs=80.9
Q ss_pred CCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECC-HHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHH
Q ss_conf 888967824507885586423998765120578389899659-6789999999631788998454773478861555689
Q gi|254780776|r 31 GRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWD-KEMVASVERGIHESNLGLNPIVEGQVLRIPVPETTEE 109 (186)
Q Consensus 31 Grasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D-~~~ik~I~kAI~~s~l~l~p~~dg~~I~i~iP~lT~E 109 (186)
|||||++||+|+|+|||+++||++||+|+++++++|+|+||| ++.+++|++||++|||||||++||++|+|+||+||+|
T Consensus 1 GRasp~lld~i~V~~yg~~~pL~~lA~Isv~~~~~l~I~~~D~~s~~~~I~kAI~~s~L~lnP~~dg~~Iri~iP~lT~E 80 (84)
T 1wih_A 1 GSSGSSGLDHITVVTADGKVALNQIGQISMKSPQVILVNMASFPECTAAAIKAIRESGMNLNPEVEGTLIRVPIPKVTSG 80 (84)
T ss_dssp CCSSSCTTSSCEEEETTEEEEHHHHSEEEEEETTEEEEECTTCTTSHHHHHHHHHTTTCCCCCEEETTEEEEECCCSSCS
T ss_pred CCCCHHHCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
T ss_conf 98894781764997789844389986655268643898612242004899998873789887442798999878989777
Q ss_pred HHH
Q ss_conf 999
Q gi|254780776|r 110 RRL 112 (186)
Q Consensus 110 ~R~ 112 (186)
+|+
T Consensus 81 ~Rk 83 (84)
T 1wih_A 81 PSS 83 (84)
T ss_dssp SCC
T ss_pred CCC
T ss_conf 678