HHsearch results for GI: 254780776 and protein with PDBid: 1ise_A

>1ise_A Ribosome recycling factor; translation; 2.20A {Escherichia coli} SCOP: d.67.3.1 PDB: 1ek8_A* 1zn0_A 1zn1_A 2rdo_8
Probab=100.00  E-value=0  Score=403.12  Aligned_cols=184  Identities=40%  Similarity=0.647  Sum_probs=180.6

Q ss_pred             CCHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHH
Q ss_conf             94200789999999999999999975313888896782450788558642399876512057838989965967899999
Q gi|254780776|r    1 MNQVIDLQNIKDRMGDTISFLKKDMMTLRTGRVSPSMLDLVKVEAYGSHVPLNQVANVTVLEPRMLVVSVWDKEMVASVE   80 (186)
Q Consensus         1 ~~e~~dl~~~~~~m~~~i~~l~~el~~irtGrasp~lld~i~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~ik~I~   80 (186)
                      |+++  +.+++++|++++++|+.+|+++|+||+||++||+|+|+|||+++||++||+||+++|++|+|+|||++++++|+
T Consensus         2 i~~i--~~~~~~kM~~~v~~l~~el~~irtGrasp~ild~I~V~~~g~~~pL~~lA~Is~~~~~~l~I~~~D~~~~~~I~   79 (185)
T 1ise_A            2 ISDI--RKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEYYGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVE   79 (185)
T ss_dssp             CHHH--HHHHHHHHHHHHHHHHHHHTTSCCSSCCGGGGTTCEEEETTEEEEGGGTEEEEEEETTEEEEEESSGGGHHHHH
T ss_pred             HHHH--HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCEEEEECCCCCCHHHHHEEEECCCCEEEEEECCHHHHHHHH
T ss_conf             4899--99999999999999999998773189997997934887799966488820346179865899737254499999


Q ss_pred             HHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf             99631788998454773478861555689999999999998889999999999999999998753589997899888999
Q gi|254780776|r   81 RGIHESNLGLNPIVEGQVLRIPVPETTEERRLALVKVAHAYAEKSKISVRNIRRDGMDHLKKSRKSGKASEDMVASLEND  160 (186)
Q Consensus        81 kAI~~s~l~l~p~~dg~~I~i~iP~lT~E~R~~lvK~~k~~~E~~K~~iR~iR~~~~~~ikk~~k~~~iseD~~~~~~~~  160 (186)
                      +||++||||+||+++|++|+|||||||+|+|++++|.||+.+|+||++||++|+++++++|+++|.+++|||+.++++++
T Consensus        80 kAI~~s~l~l~p~~dg~~irv~iP~~T~E~R~~l~K~~k~~~E~aK~~iR~iR~~~~~~ik~~~k~~~iseD~~k~~~~~  159 (185)
T 1ise_A           80 KAIMASDLGLNPNSAGSDIRVPLPPLTEERRKDLTKIVRGEAEQARVAVRNVGRDANDKVKALLKDKEISEDDDRRSQDD  159 (185)
T ss_dssp             HHHHTTCTTCCCEESSSEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
T ss_conf             99986899999875887356259966799999999999999999999999999999999987532489886588889999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             99999999999999999999887449
Q gi|254780776|r  161 IQKITDSTIKNIDSFFEEKKKEIMHF  186 (186)
Q Consensus       161 iq~lt~~~~~~id~~~~~Kekell~~  186 (186)
                      ||++||+|++++|++++.||+|||+|
T Consensus       160 iq~ltd~~~~~id~~~~~KekEll~~  185 (185)
T 1ise_A          160 VQKLTDAAIKKIEAALADKEAELMQF  185 (185)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             99999999999999999999997379