HHsearch alignment for GI: 254780777 and conserved domain: COG0528
>COG0528 PyrH Uridylate kinase [Nucleotide transport and metabolism].
Probab=100.00 E-value=0 Score=310.22 Aligned_cols=236 Identities=52% Similarity=0.788 Sum_probs=226.9
Q ss_pred CCCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 88824999994003685388777089999999999999997699099982365410233442037777540246788888
Q gi|254780777|r 3 DFPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMGML 82 (242)
Q Consensus 3 ~~~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (242)
T Consensus 2 ~~~~~rillkLsGe~l~g~~~~gid~~~i~~~a~~i~~~~~~g~eV~iVvGGGni~Rg~~~~~~---g~~r~~~D~mGml 78 (238)
T COG0528 2 KPKYMRILLKLSGEALAGEQGFGIDPEVLDRIANEIKELVDLGVEVAVVVGGGNIARGYIGAAA---GMDRVTADYMGML 78 (238)
T ss_pred CCCEEEEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHC---CCCHHHHHHHHHH
T ss_conf 8633799999421036478888879899999999999998669689999789789976789876---9851224688899
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHH
Q ss_conf 98999999999997618864113400100245665432100001100111112465567776215788888641644665
Q gi|254780777|r 83 STVINALALDLALRKINVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGNAFLTTDSAAALRASEIGADVIL 162 (242)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~a~~ia~~~~ad~l~ 162 (242)
T Consensus 79 aTvmNal~L~~aL~~~~~~~~v~sai~~~~~~e~~~~~~A~~~l~~grVvIf~gGtg~P~fTTDt~AALrA~ei~ad~ll 158 (238)
T COG0528 79 ATVMNALALQDALERLGVDTRVQSAIAMPQVAEPYSRREAIRHLEKGRVVIFGGGTGNPGFTTDTAAALRAEEIEADVLL 158 (238)
T ss_pred HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEE
T ss_conf 99999999999986358761221311176666866799999999749989991888999873479999999983886899
Q ss_pred HCCC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEECC
Q ss_conf 1475-435123432234444444411599998559981409999999974996999518985479999779987824668
Q gi|254780777|r 163 KGTQ-VDGVYSADPRVHASSTRFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIISG 241 (242)
Q Consensus 163 i~td-vdGiyt~dP~~~~~ak~i~~is~~e~l~~G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~~ 241 (242)
T Consensus 159 ~atn~VDGVY~~DPkk~pdA~~~~~Lty~e~l~~~l~vmD~tA~~l~~~~~i~i~Vfn~~~~~~l~~~~~ge~~GT~V~~ 238 (238)
T COG0528 159 KATNKVDGVYDADPKKDPDAKKYDTLTYDEVLKIGLKVMDPTAFSLARDNGIPIIVFNINKPGNLKRALKGEEVGTIVEP 238 (238)
T ss_pred EECCCCCCEECCCCCCCCCCEECCCCCHHHHHHHCCEEECHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCCCCCEEECC
T ss_conf 84067780368999889882232237999999724624059999999975994899937887659999748967417069