HHsearch alignment for GI: 254780777 and conserved domain: COG0549
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism].
Probab=99.55 E-value=2.1e-13 Score=102.31 Aligned_cols=228 Identities=22% Similarity=0.284 Sum_probs=139.0
Q ss_pred EEEEEEEEEEEEECCCC---CCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHH--C----CCCCCCCHHHHH
Q ss_conf 49999940036853887---77089999999999999997699099982365410233442--0----377775402467
Q gi|254780777|r 7 KRVLLKVSGEALAGISG---FGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVV--A----ENYLLCERSTVD 77 (242)
Q Consensus 7 KrIViKiGGSsL~~~~~---~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~--~----~~~~~~~~~~~~ 77 (242)
T Consensus 1 ~~iVvALGGNAll~~g~~~tae~Q~~~v~~ta~~i~~l~~~g~e~VitHGNGPQVG~l~lq~~aa~~~~~~p~~PLd~~~ 80 (312)
T COG0549 1 KRIVVALGGNALLQRGEPLTAEAQYEAVKITAEQIADLIASGYEVVITHGNGPQVGLLLLQNEAADSEKGVPAYPLDVLV 80 (312)
T ss_pred CEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 91899935345347999989899999999999999999855885999718975677999876653254578886468886
Q ss_pred H--HHHHHHHHHHHHHHHHHHHHCCC---CCCCCC-----------------------CHHHHHHHH-------------
Q ss_conf 8--88889899999999999761886---411340-----------------------010024566-------------
Q gi|254780777|r 78 S--MGMLSTVINALALDLALRKINVP---TVILSS-----------------------IFMPQVCEV------------- 116 (242)
Q Consensus 78 ~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~------------- 116 (242)
T Consensus 81 AmsQG~IGy~-l~qal~n~l~~~~~~~~v~tvvTqv~VD~nDPAF~nPtKpIGpfY~~eea~~l~~~~gw~~keD~~rG~ 159 (312)
T COG0549 81 AMSQGMIGYM-LQQALRNELPRRGLEKPVVTVVTQVEVDANDPAFLNPTKPIGPFYSEEEAEELAKEYGWVFKEDAGRGY 159 (312)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCE
T ss_conf 7301289999-999999776425877742699999997689844359998777876999999988663967865499873
Q ss_pred ------------HHHHHHCCHHHHCCCCCCCCCCCCC-------------CCCCHHHHHHHHHHHCHHHHHHCCCCCCCC
Q ss_conf ------------5432100001100111112465567-------------776215788888641644665147543512
Q gi|254780777|r 117 ------------FSCRNAVSYLSQGKVVIFSGGTGNA-------------FLTTDSAAALRASEIGADVILKGTQVDGVY 171 (242)
Q Consensus 117 ------------~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~D~~a~~ia~~~~ad~l~i~tdvdGiy 171 (242)
T Consensus 160 RRVVpSP~P~~IvE~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~~~GVeAVIDKDlasalLA~~i~AD~liILTdVd~Vy 239 (312)
T COG0549 160 RRVVPSPKPVRIVEAEAIKALLESGHVVIAAGGGGIPVVEEGAGLQGVEAVIDKDLASALLAEQIDADLLIILTDVDAVY 239 (312)
T ss_pred EEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEECCCHHE
T ss_conf 68149999712031788999986798899957887444861897310368981187789999871589899985465111
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHH--------CCCCCCCHH-HHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEECC
Q ss_conf 34322344444444115999985--------599814099-99999974996999518985479999779987824668
Q gi|254780777|r 172 SADPRVHASSTRFDSLTYNQFIE--------KGLKVMDCA-SVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIISG 241 (242)
Q Consensus 172 t~dP~~~~~ak~i~~is~~e~l~--------~G~~v~~~~-A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~~ 241 (242)
T Consensus 240 ~n~g--kp~q~~L~~v~~~e~~~yl~eg~Fa~GSM~PKVeAai~FV~~~gk~A~Its---Le~~~~~l~g~-~GT~I~~ 312 (312)
T COG0549 240 VNFG--KPNQQALDRVTVDEMEKYLAEGQFAAGSMGPKVEAAISFVENTGKPAIITS---LENAEAALEGK-AGTVIVP 312 (312)
T ss_pred ECCC--CCCCHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEECC---HHHHHHHHCCC-CCCEECC
T ss_conf 1279--955112224699999999864798888731889999999984798369775---98889986467-8858519