HHsearch alignment for GI: 254780777 and conserved domain: PRK12454
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed.
Probab=99.72 E-value=3.4e-16 Score=119.50 Aligned_cols=228 Identities=20% Similarity=0.219 Sum_probs=138.1
Q ss_pred EEEEEEEEEEEEECCCCC-CC--CHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH-HHHH--HCC----CCCCCCHHHH
Q ss_conf 499999400368538877-70--899999999999999976990999823654102-3344--203----7777540246
Q gi|254780777|r 7 KRVLLKVSGEALAGISGF-GV--DIDSVNRICADIAEVYAKGIEIGIVVGGGNIFR-GSQV--VAE----NYLLCERSTV 76 (242)
Q Consensus 7 KrIViKiGGSsL~~~~~~-~~--~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~-~~~~--~~~----~~~~~~~~~~ 76 (242)
T Consensus 3 k~iVvALGGNAl~~~g~~~t~~~Q~~~v~~~a~~ia~li~~g~~vVitHGNGPQVG~i~l~~~~~~~~~~p~~PLd~~~A 82 (313)
T PRK12454 3 KRIVIALGGNALQQRGEKGTAENMMKNVRRTAEQIARLIEEGYEVVITHGNGPQVGNLLLQMDAAKDVGIPPFPLDVAGA 82 (313)
T ss_pred CEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 55999808365089999999999999999999999999987997999818813999999999873246899866035523
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCC-----------------------HHHHHHHHH-----------HH
Q ss_conf 7888889899999999999761886411---3400-----------------------100245665-----------43
Q gi|254780777|r 77 DSMGMLSTVINALALDLALRKINVPTVI---LSSI-----------------------FMPQVCEVF-----------SC 119 (242)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------------------~~~~~~~~~-----------~~ 119 (242)
T Consensus 83 ~sQG~IGy~lqq-al~n~L~~~~~~~~v~tlvTqv~VD~~DpAF~~PtKpIGpfy~~eeA~~l~~~~gw~~~eD~grG~R 161 (313)
T PRK12454 83 MTQGWIGYMIQQ-ALRNVLPKRGIERQVATIVTQTIVDKNDPAFQNPTKPVGPFYDEEEAKKLAKEKGWIVKEDAGRGYR 161 (313)
T ss_pred CCCHHHHHHHHH-HHHHHHHHCCCCCCEEEEEEEEEECCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCEE
T ss_conf 013489999999-9999998539998469999899987876322089886268879999999998559789764898558
Q ss_pred --------------HHHCCHHHHCCCCCCCCCCCCC-------------CCCCHHHHHHHHHHHCHHHHHHCCCCCCCCC
Q ss_conf --------------2100001100111112465567-------------7762157888886416446651475435123
Q gi|254780777|r 120 --------------RNAVSYLSQGKVVIFSGGTGNA-------------FLTTDSAAALRASEIGADVILKGTQVDGVYS 172 (242)
Q Consensus 120 --------------~~~~~~~~~~~~~~~~~~~~~~-------------~~~~D~~a~~ia~~~~ad~l~i~tdvdGiyt 172 (242)
T Consensus 162 RVVpSP~P~~IvE~~~I~~Lv~~g~iVIa~GGGGIPVv~~~g~l~GveAVIDKD~aaa~LA~~l~Ad~liILTdVd~V~~ 241 (313)
T PRK12454 162 RVVPSPDPLGIVEIETIKMLVENGVIVIAAGGGGIPVIEEDGELKGVEAVIDKDLASELLAEELNADIFIILTDVEKVYL 241 (313)
T ss_pred EECCCCCCCEEECHHHHHHHHHCCCEEEEECCCCCCEECCCCCEECCCEEECCCHHHHHHHHHHCCCEEEEEECCCHHEE
T ss_conf 86179999427528999999978988999489856668559827565204445188999999709998999616650000
Q ss_pred CCCCCCCCCCCCCCCCHHHHHH--------CCCCCCCHHH-HHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEECC
Q ss_conf 4322344444444115999985--------5998140999-9999974996999518985479999779987824668
Q gi|254780777|r 173 ADPRVHASSTRFDSLTYNQFIE--------KGLKVMDCAS-VVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIISG 241 (242)
Q Consensus 173 ~dP~~~~~ak~i~~is~~e~l~--------~G~~v~~~~A-~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~~ 241 (242)
T Consensus 242 n~--g~p~q~~l~~it~~e~~~~~~eg~F~~GsM~PKV~Aai~Fve~gg~~aiIts---l~~~~~al~g~-~GT~IvP 313 (313)
T PRK12454 242 NY--GKPDQKALDKVTVDEAKKYYEEGHFPAGSMGPKILAAIRFVENGGRRAVIGD---LEKAVEALEGK-TGTRIIP 313 (313)
T ss_pred CC--CCCCHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC---HHHHHHHHCCC-CCCEECC
T ss_conf 38--9964122403889999999875998888826999999999994797699998---89999996799-9988659