HHsearch alignment for GI: 254780777 and conserved domain: cd02115
>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=100.00 E-value=2.5e-35 Score=237.51 Aligned_cols=222 Identities=24% Similarity=0.309 Sum_probs=170.1
Q ss_pred EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH-HHHCC-----CCCCCCHHHHHHHHHHH
Q ss_conf 9994003685388777089999999999999997699099982365410233-44203-----77775402467888889
Q gi|254780777|r 10 LLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGS-QVVAE-----NYLLCERSTVDSMGMLS 83 (242)
Q Consensus 10 ViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~ 83 (242)
T Consensus 1 ViK~GGssl~~-------~~~~~~~~~~i~~l~~~g~~~vvV~sa~~~it~~l~~~~~~~~~~~~~~~t~~~~~~i~~~g 73 (248)
T cd02115 1 VIKFGGSSVSS-------EERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLRITDRETDALAAMG 73 (248)
T ss_pred CEEECHHHCCC-------HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf 99889136069-------99999999999999978999899969844532999986535433136789989999999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH---------HHHHHHHHCCHHHHCCCCCCCCC--------CCCCCCCCH
Q ss_conf 8999999999997618864113400100245---------66543210000110011111246--------556777621
Q gi|254780777|r 84 TVINALALDLALRKINVPTVILSSIFMPQVC---------EVFSCRNAVSYLSQGKVVIFSGG--------TGNAFLTTD 146 (242)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~D 146 (242)
T Consensus 74 ~~~~~~~l~~~L~~~g~~a~~l~~~~~~~~~~~~~~~~~v~~~~~~~l~~~l~~~~ipVi~g~~~~~~~~~~~l~~~~sD 153 (248)
T cd02115 74 EGMSNLLIAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEKETGTLGRGGSD 153 (248)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEECCCCCC
T ss_conf 99999999999985699816986553233136644432102268999998774167668136345556777633078878
Q ss_pred HHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH---CCCCCCCHHHHHHHHHCCCCEEEEECCCC
Q ss_conf 578888864164466514754351234322344444444115999985---59981409999999974996999518985
Q gi|254780777|r 147 SAAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIE---KGLKVMDCASVVLARDCSIPIIVFSIHSP 223 (242)
Q Consensus 147 ~~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~---~G~~v~~~~A~~~a~~~gI~v~I~ng~~~ 223 (242)
T Consensus 154 ~~Aa~lA~~l~A~~lii~TDV~Gv~~~dp~~~~~a~~i~~ls~~ea~el~~~G~~v~~~~a~~~a~~~gi~v~I~n~~~~ 233 (248)
T cd02115 154 STAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAGAMVLKPKAADPAARAGIPVRIANTENP 233 (248)
T ss_pred HHHHHHHHHHCCCHHHHEECCCCCEECCCCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99999999949665531045786161899868867588653899999998559967489999999987997999139997
Q ss_pred CHHHHHHCCCCCCCEE
Q ss_conf 4799997799878246
Q gi|254780777|r 224 GGIWGGLSGIGRSTII 239 (242)
Q Consensus 224 ~~i~~~l~Ge~~GT~I 239 (242)
T Consensus 234 ~~l-elf~~~~~GTlI 248 (248)
T cd02115 234 GAL-ALFTPDGGGTLI 248 (248)
T ss_pred CHH-HHCCCCCCCCCC
T ss_conf 533-411799996819