HHsearch alignment for GI: 254780777 and conserved domain: cd02115

>cd02115 AAK Amino Acid Kinases (AAK) superfamily, catalytic domain; present in such enzymes like N-acetylglutamate kinase (NAGK), carbamate kinase (CK), aspartokinase (AK), glutamate-5-kinase (G5K) and UMP kinase (UMPK). The AAK superfamily includes kinases that phosphorylate a variety of amino acid substrates. These kinases catalyze the formation of phosphoric anhydrides, generally with a carboxylate, and use ATP as the source of the phosphoryl group; are involved in amino acid biosynthesis. Some of these kinases control the process via allosteric feed-back inhibition.
Probab=100.00  E-value=2.5e-35  Score=237.51  Aligned_cols=222  Identities=24%  Similarity=0.309  Sum_probs=170.1

Q ss_pred             EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH-HHHCC-----CCCCCCHHHHHHHHHHH
Q ss_conf             9994003685388777089999999999999997699099982365410233-44203-----77775402467888889
Q gi|254780777|r   10 LLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGS-QVVAE-----NYLLCERSTVDSMGMLS   83 (242)
Q Consensus        10 ViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~~~   83 (242)
T Consensus         1 ViK~GGssl~~-------~~~~~~~~~~i~~l~~~g~~~vvV~sa~~~it~~l~~~~~~~~~~~~~~~t~~~~~~i~~~g   73 (248)
T cd02115           1 VIKFGGSSVSS-------EERLRNLARILVKLASEGGRVVVVHGAGPQITDELLAHGELLGYARGLRITDRETDALAAMG   73 (248)
T ss_pred             CEEECHHHCCC-------HHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
T ss_conf             99889136069-------99999999999999978999899969844532999986535433136789989999999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH---------HHHHHHHHCCHHHHCCCCCCCCC--------CCCCCCCCH
Q ss_conf             8999999999997618864113400100245---------66543210000110011111246--------556777621
Q gi|254780777|r   84 TVINALALDLALRKINVPTVILSSIFMPQVC---------EVFSCRNAVSYLSQGKVVIFSGG--------TGNAFLTTD  146 (242)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~D  146 (242)
T Consensus        74 ~~~~~~~l~~~L~~~g~~a~~l~~~~~~~~~~~~~~~~~v~~~~~~~l~~~l~~~~ipVi~g~~~~~~~~~~~l~~~~sD  153 (248)
T cd02115          74 EGMSNLLIAAALEQHGIKAVPLDLTQAGFASPNQGHVGKITKVSTDRLKSLLENGILPILSGFGGTDEKETGTLGRGGSD  153 (248)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEEECCEECCCCCCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEECCCCCC
T ss_conf             99999999999985699816986553233136644432102268999998774167668136345556777633078878


Q ss_pred             HHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH---CCCCCCCHHHHHHHHHCCCCEEEEECCCC
Q ss_conf             578888864164466514754351234322344444444115999985---59981409999999974996999518985
Q gi|254780777|r  147 SAAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIE---KGLKVMDCASVVLARDCSIPIIVFSIHSP  223 (242)
Q Consensus       147 ~~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~---~G~~v~~~~A~~~a~~~gI~v~I~ng~~~  223 (242)
T Consensus       154 ~~Aa~lA~~l~A~~lii~TDV~Gv~~~dp~~~~~a~~i~~ls~~ea~el~~~G~~v~~~~a~~~a~~~gi~v~I~n~~~~  233 (248)
T cd02115         154 STAALLAAALKADRLVILTDVDGVYTADPRKVPDAKLLSELTYEEAAELAYAGAMVLKPKAADPAARAGIPVRIANTENP  233 (248)
T ss_pred             HHHHHHHHHHCCCHHHHEECCCCCEECCCCCCCCCEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf             99999999949665531045786161899868867588653899999998559967489999999987997999139997


Q ss_pred             CHHHHHHCCCCCCCEE
Q ss_conf             4799997799878246
Q gi|254780777|r  224 GGIWGGLSGIGRSTII  239 (242)
Q Consensus       224 ~~i~~~l~Ge~~GT~I  239 (242)
T Consensus       234 ~~l-elf~~~~~GTlI  248 (248)
T cd02115         234 GAL-ALFTPDGGGTLI  248 (248)
T ss_pred             CHH-HHCCCCCCCCCC
T ss_conf             533-411799996819