HHsearch alignment for GI: 254780777 and conserved domain: cd04234
>cd04234 AAK_AK AAK_AK: Amino Acid Kinase Superfamily (AAK), Aspartokinase (AK); this CD includes the N-terminal catalytic domain of aspartokinase (4-L-aspartate-4-phosphotransferase;). AK is the first enzyme in the biosynthetic pathway of the aspartate family of amino acids (lysine, threonine, methionine, and isoleucine) and the bacterial cell wall component, meso-diaminopimelate. It also catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. One mechanism for the regulation of this pathway is by the production of several isoenzymes of aspartokinase with different repressors and allosteric inhibitors. Pairs of ACT domains are proposed to specifically bind amino acids leading to allosteric regulation of the enzyme. In Escherichia coli, three different aspartokinase isoenzymes are regulated specifically by lysine, methionine, and threonine. AK-HSDHI (ThrA) and AK-HSDHII (MetL) are bifunctional enzymes that consist of an N-terminal AK and a C-terminal homoserine dehyd
Probab=100.00 E-value=6.5e-34 Score=228.73 Aligned_cols=202 Identities=26% Similarity=0.290 Sum_probs=155.4
Q ss_pred EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC--CHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 999940036853887770899999999999999976990999823654--102334420377775402467888889899
Q gi|254780777|r 9 VLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGN--IFRGSQVVAENYLLCERSTVDSMGMLSTVI 86 (242)
Q Consensus 9 IViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (242)
T Consensus 2 ~V~KFGGtSv~~-------~~~i~~v~~ii~~~-~~~~~~vVVvSA~~g~Td~L~~-------------~a~ils~GE~l 60 (227)
T cd04234 2 VVQKFGGTSVAS-------AERIKRVADIIKAY-EKGNRVVVVVSAMGGVTDLLIE-------------LALLLSFGERL 60 (227)
T ss_pred EEEEECCCCCCC-------HHHHHHHHHHHHHH-HCCCCEEEEECCCCCCHHHHHH-------------HHHHHHHHHHH
T ss_conf 899678301799-------99999999999865-4389889997388432899999-------------99999299999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCHHHHHHHH----------HHHHHHCCHHHHCCCCCCCCC---------CCCCCCCCHH
Q ss_conf 999999999761886411340010024566----------543210000110011111246---------5567776215
Q gi|254780777|r 87 NALALDLALRKINVPTVILSSIFMPQVCEV----------FSCRNAVSYLSQGKVVIFSGG---------TGNAFLTTDS 147 (242)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~D~ 147 (242)
T Consensus 61 Sa~lla~~L~~~Gi~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~Vv~GF~g~~~~G~~tTLGRGGSD~ 140 (227)
T cd04234 61 SARLLAAALRDRGIKARSLDARQAGITTDDNHGAARIIEISYERLKELLAEIGKVPVVTGFIGRNEDGEITTLGRGGSDY 140 (227)
T ss_pred HHHHHHHHHHHCCCCEEEECHHHCEEECCCCCCCEEEHHHCHHHHHHHHHHCCCEEEECCEEEECCCCCEEEECCCCHHH
T ss_conf 99999999997899719964157206416876520645428999999997389679962604540588468838885678
Q ss_pred HHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC---CCCCCCHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 788888641644665147543512343223444444441159999855---99814099999999749969995189854
Q gi|254780777|r 148 AAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIEK---GLKVMDCASVVLARDCSIPIIVFSIHSPG 224 (242)
Q Consensus 148 ~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~~---G~~v~~~~A~~~a~~~gI~v~I~ng~~~~ 224 (242)
T Consensus 141 TA~~lA~~l~A~~~~I~TDVdGi~taDPr~v~~A~~i~~lsy~Ea~ela~~GakVlHp~ti~pa~~~~Ipi~i~nt~~p- 219 (227)
T cd04234 141 SAAALAAALGADEVEIWTDVDGIYTADPRIVPEARLIPEISYDEALELAYFGAKVLHPRAVEPARKANIPIRVKNTFNP- 219 (227)
T ss_pred HHHHHHHHHCCHHHEEEECCCEEECCCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCCCC-
T ss_conf 9999999818602222126870472799747886240441999999999779741699999999986983999289999-
Q ss_pred HHHHHHCCCCCCCEEC
Q ss_conf 7999977998782466
Q gi|254780777|r 225 GIWGGLSGIGRSTIIS 240 (242)
Q Consensus 225 ~i~~~l~Ge~~GT~I~ 240 (242)
T Consensus 220 --------~~~GT~Is 227 (227)
T cd04234 220 --------EAPGTLIT 227 (227)
T ss_pred --------CCCCEEEC
T ss_conf --------99981769