>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als

Probab=100.00 E-value=0 Score=336.32 Aligned_cols=229 Identities=50% Similarity=0.782 Sum_probs=205.6 Q ss_pred EEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH Q ss_conf 99999400368538877708999999999999999769909998236541023344203777754024678888898999 Q gi|254780777|r 8 RVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMGMLSTVIN 87 (242) Q Consensus 8 rIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (242) T Consensus 1 RIViKiG~s~lt~~~~-~l~~~~i~~la~~i~~l~~~g~evilV~s~G~~a~g~~~~~~~~~---~~~~~~~~~~a~~~~ 76 (229) T cd04239 1 RIVLKLSGEALAGEGG-GIDPEVLKEIAREIKEVVDLGVEVAIVVGGGNIARGYIAAARGMP---RATADYIGMLATVMN 76 (229) T ss_pred CEEEEECHHHHCCCCC-CCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCCCC---CCHHHHHHHHHHHHH T ss_conf 9899976577018999-919999999999999999779979999899734466434415667---135999999999999 Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCC Q ss_conf 99999999761886411340010024566543210000110011111246556777621578888864164466514754 Q gi|254780777|r 88 ALALDLALRKINVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGNAFLTTDSAAALRASEIGADVILKGTQV 167 (242) Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~a~~ia~~~~ad~l~i~tdv 167 (242) T Consensus 77 ~~ll~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ipV~~~~~~~~~~dnD~lAa~vA~~v~AD~lIilTDV 156 (229) T cd04239 77 ALALQDALEKLGVKTRVMSAIPMQGVAEPYIRRRAIRHLEKGRIVIFGGGTGNPGFTTDTAAALRAEEIGADVLLKATNV 156 (229) T ss_pred HHHHHHHHHHCCCCEEEECHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCC T ss_conf 99999999867997898317760330102239999999853977998365578876500899999997299889861123 Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEEC Q ss_conf 3512343223444444441159999855998140999999997499699951898547999977998782466 Q gi|254780777|r 168 DGVYSADPRVHASSTRFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIIS 240 (242) Q Consensus 168 dGiyt~dP~~~~~ak~i~~is~~e~l~~G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~ 240 (242) T Consensus 157 DGlY~~dP~~~~~Ak~I~~is~~e~~~~g~~~~k~~Aa~~a~~~Gi~~~I~ng~~~~~i~~~l~G~~vGTlI~ 229 (229) T cd04239 157 DGVYDADPKKNPDAKKYDRISYDELLKKGLKVMDATALTLCRRNKIPIIVFNGLKPGNLLRALKGEHVGTLIE 229 (229) T ss_pred CCCCCCCCCCCCCCEECCCCCHHHHHHCCCCEECHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEEC T ss_conf 8617889887998748771289999875987444999999998799699977999338999977999981659

HHsearch alignment for GI: 254780777 and conserved domain: cd04239