HHsearch alignment for GI: 254780777 and conserved domain: cd04240
>cd04240 AAK_UC AAK_UC: Uncharacterized (UC) amino acid kinase-like proteins found mainly in archaea and a few bacteria. Sequences in this CD are members of the Amino Acid Kinase (AAK) superfamily.
Probab=99.90 E-value=1.4e-22 Score=158.79 Aligned_cols=199 Identities=21% Similarity=0.233 Sum_probs=136.9
Q ss_pred EEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99940036853887770899999999999999976990999823654102334420377775402467888889899999
Q gi|254780777|r 10 LLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMGMLSTVINAL 89 (242)
Q Consensus 10 ViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (242)
T Consensus 1 VvKiGGSL~~~----------~~~ll~~l~~~--~~~~v~IVpGGG~fAd~vR~~~~~~~-~~d~~aH~mAi~Am~~~a~ 67 (203)
T cd04240 1 VVKIGGSLIRE----------AVRLLRWLKTL--SGGGVVIVPGGGPFADVVRRYQERKG-LSDAAAHWMAILAMEQYGY 67 (203)
T ss_pred CEEEEEECCCC----------HHHHHHHHHHH--CCCCEEEEECCHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHH
T ss_conf 97982056466----------89999999983--59978999798089999999999829-9878999999999999999
Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCC---CCCCHHHHHHHHHHHCHHHHHHCCC
Q ss_conf 9999997618864113400100245665432100001100111112465567---7762157888886416446651475
Q gi|254780777|r 90 ALDLALRKINVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGNA---FLTTDSAAALRASEIGADVILKGTQ 166 (242)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~D~~a~~ia~~~~ad~l~i~td 166 (242)
T Consensus 68 ll~~~~~~~~----~~~~~~---~~~~-~~~~~~~v~lP~~~l~--~~~~lp~sWdvtsDs~a~~~A~~l~a~~li~~~~ 137 (203)
T cd04240 68 LLADLEPRLV----ARTLAE---LTDV-LERGKIAILLPYRLLL--DTDPLPHSWEVTSDSIAAWLAKKLGAKRLVIVTD 137 (203)
T ss_pred HHHHHCCHHH----CCCHHH---HHHH-HHCCCCEEEECHHHHC--CCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 9996013101----046477---9999-7338915871158751--5898887877661899999999759885899856
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCC-CCCCEE
Q ss_conf 4351234322344444444115999985599814099999999749969995189854799997799-878246
Q gi|254780777|r 167 VDGVYSADPRVHASSTRFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGI-GRSTII 239 (242)
Q Consensus 167 vdGiyt~dP~~~~~ak~i~~is~~e~l~~G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge-~~GT~I 239 (242)
T Consensus 138 vdGiy~~~------~kl~~~i~~~~l~--~~~~VD~~~~~~~~~~~i~~~VvnG~~p~~i~~~l~g~~~~GT~I 203 (203)
T cd04240 138 VDGIYEKD------GKLVNEIAAAELL--GETSVDPAFPRLLTKYGIRCYVVNGDDPERVLAALRGREGVGTRI 203 (203)
T ss_pred CCCCCCCC------HHHHHHCCHHHHC--CCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCCCCCCCCCC
T ss_conf 77551875------0554115898864--887410778999997696399987998799999986898798579