HHsearch alignment for GI: 254780777 and conserved domain: cd04251
>cd04251 AAK_NAGK-UC AAK_NAGK-UC: N-Acetyl-L-glutamate kinase - uncharacterized (NAGK-UC). This domain is similar to Escherichia coli and Pseudomonas aeruginosa NAGKs which catalyze the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis. These uncharacterized domain sequences are found in some bacteria (Deinococci and Chloroflexi) and archea and belong to the Amino Acid Kinase Superfamily (AAK).
Probab=99.79 E-value=4.8e-18 Score=130.91 Aligned_cols=208 Identities=18% Similarity=0.219 Sum_probs=128.4
Q ss_pred EEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCC------------CCCCHHHH
Q ss_conf 999940036853887770899999999999999976990999823654102334420377------------77540246
Q gi|254780777|r 9 VLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENY------------LLCERSTV 76 (242)
Q Consensus 9 IViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~------------~~~~~~~~ 76 (242)
T Consensus 1 iVIK~GG~~l~d----------~~~~---~~~l~~lG~~~VlVHGgg~qI~~~l~~~gi~~~fv~~~~Gl~~RvTd~~~l 67 (257)
T cd04251 1 IVVKIGGSVVSD----------LDKV---IDDIANFGERLIVVHGGGNYVNEYLKRLGVEPKFVTSPSGIRSRYTDKETL 67 (257)
T ss_pred CEEEECHHHHHC----------HHHH---HHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCEEECCHHHH
T ss_conf 989989588769----------8999---999997599989997997799999998599967741789862021898999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH--------------------------HHHHHHHHHCCHHHHCC
Q ss_conf 7888889899999999999761886411340010024--------------------------56654321000011001
Q gi|254780777|r 77 DSMGMLSTVINALALDLALRKINVPTVILSSIFMPQV--------------------------CEVFSCRNAVSYLSQGK 130 (242)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~ 130 (242)
T Consensus 68 ~-~v~~~~g~vn~~lv~~l~~~g~~a~glsg~d~~~~~~~~~~~~~~~~~g~~~~id~g~vG~v~~V~~~~i~~ll~~g~ 146 (257)
T cd04251 68 E-VFVMVMGLINKKIVARLHSLGVKAVGLTGLDGRLLEAKRKEIVRVNERGRKMIIRGGYTGKVEKVNSDLIEALLDAGY 146 (257)
T ss_pred H-HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCEEEEEEECHHHHHHHHHCCC
T ss_conf 9-999999999999999998489986522266673689851252442467860104579767798987899999984899
Q ss_pred CCCCCC-----CCCCCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-----CCCCCC
Q ss_conf 111124-----6556777621578888864164466514754351234322344444444115999985-----599814
Q gi|254780777|r 131 VVIFSG-----GTGNAFLTTDSAAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQFIE-----KGLKVM 200 (242)
Q Consensus 131 ~~~~~~-----~~~~~~~~~D~~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~-----~G~~v~ 200 (242)
T Consensus 147 iPVispig~~~~G~~~NvnaD~~A~~iA~aL~A~kLI~ltdv~Gvl~-d------g~li~~l~~~e~~~li~~i~gGM~p 219 (257)
T cd04251 147 LPVVSPVAYSEEGEPLNVDGDRAAAAIAAALKAERLILLTDVEGLYL-D------GRVIERITVSDAESLLEKAGGGMKR 219 (257)
T ss_pred CEEECCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEEECCCEEEC-C------CEECCCCCHHHHHHHHHHHCCCHHH
T ss_conf 45866766688760742877999999999809996999968840424-9------8453658999999999873485399
Q ss_pred CHHHHHHHHHCCCC-EEEEECCCCCHHHHHHCCCCCCCEE
Q ss_conf 09999999974996-9995189854799997799878246
Q gi|254780777|r 201 DCASVVLARDCSIP-IIVFSIHSPGGIWGGLSGIGRSTII 239 (242)
Q Consensus 201 ~~~A~~~a~~~gI~-v~I~ng~~~~~i~~~l~Ge~~GT~I 239 (242)
T Consensus 220 Kl~aa~~A~~~GV~~v~Ii~g~~~~~ll~el~G--~GT~I 257 (257)
T cd04251 220 KLLAAAEAVEGGVREVVIGDARADSPISSALNG--GGTVI 257 (257)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCC--CCCCC
T ss_conf 999999999809997999079998779999658--98469