HHsearch alignment for GI: 254780777 and conserved domain: cd04256
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00 E-value=7.1e-44 Score=290.17 Aligned_cols=234 Identities=14% Similarity=0.108 Sum_probs=181.6
Q ss_pred CEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC-HHHHHHH---------------CCCCC
Q ss_conf 2499999400368538877708999999999999999769909998236541-0233442---------------03777
Q gi|254780777|r 6 YKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNI-FRGSQVV---------------AENYL 69 (242)
Q Consensus 6 ~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~-~~~~~~~---------------~~~~~ 69 (242)
T Consensus 8 ~krIVIKiGss~lt~~d~~~~~~~~i~~l~~~I~~L~~~G~evvlVsSGAv~~G~~~l~~~~~~~~~~~~~~~~~~~~~~ 87 (284)
T cd04256 8 AKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQLKDM 87 (284)
T ss_pred CCEEEEEECHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCHHHCCHHCCCCHHHHHHCCCCCCCC
T ss_conf 87899995702237999997589999999999999997899699990684653811421100022024433022345557
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHH-HHHHCCHHHHCCCCCCCCCC-----C--
Q ss_conf 75402467888889899999999999761886411340--01002456654-32100001100111112465-----5--
Q gi|254780777|r 70 LCERSTVDSMGMLSTVINALALDLALRKINVPTVILSS--IFMPQVCEVFS-CRNAVSYLSQGKVVIFSGGT-----G-- 139 (242)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~-- 139 (242)
T Consensus 88 ~~~~~~~qa~aavGQ~~Lm~~y~~~f~~~~~~~aQiLlt~~D~~~r~~~~n~~~tl~~Ll~~gvIPIvNEND~Va~~e~~ 167 (284)
T cd04256 88 PQMELDGRACAAVGQSGLMALYEAMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAVSPPPEP 167 (284)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
T ss_conf 52007899999820999999999999875981688727877730279999999999999738978576378610246556
Q ss_pred -------CCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH--HH--------CCCCCCCH
Q ss_conf -------67776215788888641644665147543512343223444444441159999--85--------59981409
Q gi|254780777|r 140 -------NAFLTTDSAAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQF--IE--------KGLKVMDC 202 (242)
Q Consensus 140 -------~~~~~~D~~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~--l~--------~G~~v~~~ 202 (242)
T Consensus 168 ~~d~~~~i~fgDND~Laa~vA~~i~Ad~LillTDVdGlyd~~P~-~~~akli~~i~~~d~~~~~~~~~s~~gtGGM~tKi 246 (284)
T cd04256 168 DEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPG-SDDAKLIHTFYPGDQQSITFGTKSRVGTGGMEAKV 246 (284)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-CCCCCEEEEECCCCHHHHHCCCCCCCCCCCHHHHH
T ss_conf 41123431135601899998876188889997257720269999-99874421455664888745788997617879999
Q ss_pred HHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEEC
Q ss_conf 99999997499699951898547999977998782466
Q gi|254780777|r 203 ASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIIS 240 (242)
Q Consensus 203 ~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~ 240 (242)
T Consensus 247 ~AA~~a~~~Gi~~~I~nG~~~~~i~~i~~g~~vGT~Ft 284 (284)
T cd04256 247 KAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFFT 284 (284)
T ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCEEC
T ss_conf 99999997899799950899668999976999882549