HHsearch alignment for GI: 254780777 and conserved domain: cd04256

>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=100.00  E-value=7.1e-44  Score=290.17  Aligned_cols=234  Identities=14%  Similarity=0.108  Sum_probs=181.6

Q ss_pred             CEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCC-HHHHHHH---------------CCCCC
Q ss_conf             2499999400368538877708999999999999999769909998236541-0233442---------------03777
Q gi|254780777|r    6 YKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNI-FRGSQVV---------------AENYL   69 (242)
Q Consensus         6 ~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~-~~~~~~~---------------~~~~~   69 (242)
T Consensus         8 ~krIVIKiGss~lt~~d~~~~~~~~i~~l~~~I~~L~~~G~evvlVsSGAv~~G~~~l~~~~~~~~~~~~~~~~~~~~~~   87 (284)
T cd04256           8 AKRIVVKLGSAVVTREDECGLALGRLASIVEQVSELQSQGREVILVTSGAVAFGKQRLRHEILLSSSMRQTLKSGQLKDM   87 (284)
T ss_pred             CCEEEEEECHHHEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHCCCHHHCCHHCCCCHHHHHHCCCCCCCC
T ss_conf             87899995702237999997589999999999999997899699990684653811421100022024433022345557


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHH-HHHHCCHHHHCCCCCCCCCC-----C--
Q ss_conf             75402467888889899999999999761886411340--01002456654-32100001100111112465-----5--
Q gi|254780777|r   70 LCERSTVDSMGMLSTVINALALDLALRKINVPTVILSS--IFMPQVCEVFS-CRNAVSYLSQGKVVIFSGGT-----G--  139 (242)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~--  139 (242)
T Consensus        88 ~~~~~~~qa~aavGQ~~Lm~~y~~~f~~~~~~~aQiLlt~~D~~~r~~~~n~~~tl~~Ll~~gvIPIvNEND~Va~~e~~  167 (284)
T cd04256          88 PQMELDGRACAAVGQSGLMALYEAMFTQYGITVAQVLVTKPDFYDEQTRRNLNGTLEELLRLNIIPIINTNDAVSPPPEP  167 (284)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC
T ss_conf             52007899999820999999999999875981688727877730279999999999999738978576378610246556


Q ss_pred             -------CCCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHH--HH--------CCCCCCCH
Q ss_conf             -------67776215788888641644665147543512343223444444441159999--85--------59981409
Q gi|254780777|r  140 -------NAFLTTDSAAALRASEIGADVILKGTQVDGVYSADPRVHASSTRFDSLTYNQF--IE--------KGLKVMDC  202 (242)
Q Consensus       140 -------~~~~~~D~~a~~ia~~~~ad~l~i~tdvdGiyt~dP~~~~~ak~i~~is~~e~--l~--------~G~~v~~~  202 (242)
T Consensus       168 ~~d~~~~i~fgDND~Laa~vA~~i~Ad~LillTDVdGlyd~~P~-~~~akli~~i~~~d~~~~~~~~~s~~gtGGM~tKi  246 (284)
T cd04256         168 DEDLQGVISIKDNDSLAARLAVELKADLLILLSDVDGLYDGPPG-SDDAKLIHTFYPGDQQSITFGTKSRVGTGGMEAKV  246 (284)
T ss_pred             CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC-CCCCCEEEEECCCCHHHHHCCCCCCCCCCCHHHHH
T ss_conf             41123431135601899998876188889997257720269999-99874421455664888745788997617879999


Q ss_pred             HHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEEC
Q ss_conf             99999997499699951898547999977998782466
Q gi|254780777|r  203 ASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIIS  240 (242)
Q Consensus       203 ~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~  240 (242)
T Consensus       247 ~AA~~a~~~Gi~~~I~nG~~~~~i~~i~~g~~vGT~Ft  284 (284)
T cd04256         247 KAALWALQGGTSVVITNGMAGDVITKILEGKKVGTFFT  284 (284)
T ss_pred             HHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCCEEC
T ss_conf             99999997899799950899668999976999882549