HHsearch results for GI: 254780777 and protein with PDBid: 2va1_A

>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=100.00  E-value=2.8e-45  Score=296.98  Aligned_cols=234  Identities=31%  Similarity=0.478  Sum_probs=179.3

Q ss_pred             CCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf             88249999940036853887770899999999999999976990999823654102334420377775402467888889
Q gi|254780777|r    4 FPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMGMLS   83 (242)
Q Consensus         4 ~~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (242)
                      +||||||||||||+|++++++.++.++|+++|++|++++++|+++++|+|| +.++++..........   .........
T Consensus        22 ~k~krIVIKiGGS~L~~~~~~~i~~~~l~~ia~~I~~l~~~g~~vivvsgG-a~~~g~~~~~~~~~~~---~~~~~~~~~   97 (256)
T 2va1_A           22 MRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGG-NIWRGSIAKELDMDRN---LADNMGMMA   97 (256)
T ss_dssp             -CCSEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHTTTSEEEEEECCT-TTCCHHHHHHTTCCHH---HHHHHHHHH
T ss_pred             CCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCC-CCCCCHHHHHCCCCCC---HHHHHHHHH
T ss_conf             016879999771243389999859999999999999998499089997788-6555511330477622---389999999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC-CCCCCHHHHHHHHHHHCHHHHH
Q ss_conf             899999999999761886411340010024566543210000110011111246556-7776215788888641644665
Q gi|254780777|r   84 TVINALALDLALRKINVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGN-AFLTTDSAAALRASEIGADVIL  162 (242)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~a~~ia~~~~ad~l~  162 (242)
                      .......+...+..............................++....++.....+. .+.++|.+|++++.+..+++++
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~a~~~a~~~~ad~li  177 (256)
T 2va1_A           98 TIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILM  177 (256)
T ss_dssp             HHHHHHHHHHHHHTTTCCEEEEESSCCTTTCEECCHHHHHHHHHTTCEEEEESTTSSSSCCHHHHHHHHHHHHTCSEEEE
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             99999999999985044300034455455677778999999861795520068776567876619999999987779977


Q ss_pred             HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEECC
Q ss_conf             1475435123432234444444411599998559981409999999974996999518985479999779987824668
Q gi|254780777|r  163 KGTQVDGVYSADPRVHASSTRFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIISG  241 (242)
Q Consensus       163 i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~~G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~~  241 (242)
                      ++|||||+||+||+++++|++|++++++|+++.|.++||++|+++|+++|||++|+||++|++|.++++||.+||+||.
T Consensus       178 ~~tdVdGvyd~dP~~~~dA~~i~~is~~e~~~~g~~~md~~Aa~la~~~gi~~~I~ng~~~~~i~~~l~Ge~vGTlIs~  256 (256)
T 2va1_A          178 GKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK  256 (256)
T ss_dssp             EESSCCSBCSCC--------CBSEEEHHHHHHHTCCSSCHHHHHHHHHTTCEEEEEESSSTTHHHHHHTTCSCEEEEEC
T ss_pred             HHCCCCCEECCCCCCCCCCEECCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf             4027884565898768775212435799997578741799999999987997899818996589999779998428709