HHsearch results for GI: 254780777 and protein with PDBid: 2va1_A
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=100.00 E-value=2.8e-45 Score=296.98 Aligned_cols=234 Identities=31% Similarity=0.478 Sum_probs=179.3
Q ss_pred CCCEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH
Q ss_conf 88249999940036853887770899999999999999976990999823654102334420377775402467888889
Q gi|254780777|r 4 FPYKRVLLKVSGEALAGISGFGVDIDSVNRICADIAEVYAKGIEIGIVVGGGNIFRGSQVVAENYLLCERSTVDSMGMLS 83 (242)
Q Consensus 4 ~~~KrIViKiGGSsL~~~~~~~~~~~~i~~ia~~I~~~~~~g~~vviV~sg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (242)
+||||||||||||+|++++++.++.++|+++|++|++++++|+++++|+|| +.++++.......... .........
T Consensus 22 ~k~krIVIKiGGS~L~~~~~~~i~~~~l~~ia~~I~~l~~~g~~vivvsgG-a~~~g~~~~~~~~~~~---~~~~~~~~~ 97 (256)
T 2va1_A 22 MRKQRIVIKISGACLKQNDSSIIDFIKINDLAEQIEKISKKYIVSIVLGGG-NIWRGSIAKELDMDRN---LADNMGMMA 97 (256)
T ss_dssp -CCSEEEEEECGGGGCSSTTCSSCHHHHHHHHHHHHHHTTTSEEEEEECCT-TTCCHHHHHHTTCCHH---HHHHHHHHH
T ss_pred CCCCEEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCC-CCCCCHHHHHCCCCCC---HHHHHHHHH
T ss_conf 016879999771243389999859999999999999998499089997788-6555511330477622---389999999
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC-CCCCCHHHHHHHHHHHCHHHHH
Q ss_conf 899999999999761886411340010024566543210000110011111246556-7776215788888641644665
Q gi|254780777|r 84 TVINALALDLALRKINVPTVILSSIFMPQVCEVFSCRNAVSYLSQGKVVIFSGGTGN-AFLTTDSAAALRASEIGADVIL 162 (242)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~a~~ia~~~~ad~l~ 162 (242)
.......+...+..............................++....++.....+. .+.++|.+|++++.+..+++++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~a~~~a~~~~ad~li 177 (256)
T 2va1_A 98 TIINGLALENALNHLNVNTIVLSAIKCDKLVHESSANNIKKAIEKEQVMIFVAGTGFPYFTTDSCAAIRAAETESSIILM 177 (256)
T ss_dssp HHHHHHHHHHHHHTTTCCEEEEESSCCTTTCEECCHHHHHHHHHTTCEEEEESTTSSSSCCHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999999999985044300034455455677778999999861795520068776567876619999999987779977
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCEECC
Q ss_conf 1475435123432234444444411599998559981409999999974996999518985479999779987824668
Q gi|254780777|r 163 KGTQVDGVYSADPRVHASSTRFDSLTYNQFIEKGLKVMDCASVVLARDCSIPIIVFSIHSPGGIWGGLSGIGRSTIISG 241 (242)
Q Consensus 163 i~tdvdGiyt~dP~~~~~ak~i~~is~~e~l~~G~~v~~~~A~~~a~~~gI~v~I~ng~~~~~i~~~l~Ge~~GT~I~~ 241 (242)
++|||||+||+||+++++|++|++++++|+++.|.++||++|+++|+++|||++|+||++|++|.++++||.+||+||.
T Consensus 178 ~~tdVdGvyd~dP~~~~dA~~i~~is~~e~~~~g~~~md~~Aa~la~~~gi~~~I~ng~~~~~i~~~l~Ge~vGTlIs~ 256 (256)
T 2va1_A 178 GKNGVDGVYDSDPKINPNAQFYEHITFNMALTQNLKVMDATALALCQENNINLLVFNIDKPNAIVDVLEKKNKYTIVSK 256 (256)
T ss_dssp EESSCCSBCSCC--------CBSEEEHHHHHHHTCCSSCHHHHHHHHHTTCEEEEEESSSTTHHHHHHTTCSCEEEEEC
T ss_pred HHCCCCCEECCCCCCCCCCEECCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCCCEEECC
T ss_conf 4027884565898768775212435799997578741799999999987997899818996589999779998428709