HHsearch alignment of GI: 254780778 and MMDB domain: 1aip_C_1-104_164-196
>1aip_C (C:1-104,C:164-196) EF-TS, elongation factor TS; nucleotide exchange, GTP-binding, complex of two elongation factors; 3.00A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-43 Score=311.18 Aligned_cols=133 Identities=38% Similarity=0.494 Sum_probs=124.2
Q ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE-CCCCCEEEEEEEEECC
Q ss_conf 558999999987199989999999962999899999999823889986510336422000044-0788536999984031
Q gi|254780778|r 4 VSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKGAMAASKREGRKVSEGLIGIAR-DGYKKASIVEVNVETD 82 (296)
Q Consensus 4 it~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkkG~~~A~Kk~~R~a~eG~v~~~~-~~~~~a~liEincETD 82 (296)
||+++||+||++||+||||||+||++++||+|+|++|||++|+++|.|+++|.|+||+|+++. ++.+.++|+|+|||||
T Consensus 2 is~e~IK~LR~~Tgagi~dCKkAL~es~gDiekAi~~Lrk~G~~kA~Kk~~r~t~eG~v~~~v~~d~~~a~liElncETD 81 (137)
T 1aip_C 2 SQMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADREAREGIIGHYIHHNQRVGVLVELNCETD 81 (137)
T ss_dssp CHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEECTTSSEEEEEEEECSSH
T ss_pred CCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCEEEEEEEECCCC
T ss_conf 84799999999869889999999998499899999999987776777877799874100047854897689999825874
Q ss_pred HHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 010226799999988875310335657786400410000146778999985434310244431022
Q gi|254780778|r 83 SLAKNTDFQSLVSNIAGIALSTDGSLDNVLAMPFDHSGITVGDGIKQQIAITGECIKLRRSALLCV 148 (296)
Q Consensus 83 FVAkn~~F~~l~~~i~~~~l~~~~~~~~~~~~~~~~~~~tv~d~i~~~ia~iGEnI~l~R~~~~~~ 148 (296)
|||||+.|++|+..+++.++.++ +.+.||+|++.+.|+++||||.||||++|..
T Consensus 82 FVAkn~~F~~l~~~i~~~~l~~~------------~~~~~~~~~~~~~~~~~~e~~~i~r~~~~~~ 135 (137)
T 1aip_C 82 FVARNELFQNLAKDLAMHIAMMN------------DDKVKVKELIQQAIAKIGENIVVRRFCRFEL 135 (137)
T ss_dssp HHHTSHHHHHHHHHHHHHHHHHC------------CTTSBHHHHHHHHHHHHCSCCEEEEEEEEET
T ss_pred HHHHCCCHHHHHHHHHHHHHCCC------------CCCCCHHHHHHHHHHHCCCCEEEEEEEEEEE
T ss_conf 15411204557778888750268------------8976199999999986189808999999982