HHsearch alignment of GI: 254780778 and MMDB domain: 1oqy_A_126-224

>1oqy_A (A:126-224) HHR23A, UV excision repair protein RAD23 homolog A; DNA repair, proteasome-mediated degradation, protein- protein interaction, replication; NMR {Homo sapiens}

Probab=95.28  E-value=0.011  Score=38.23  Aligned_cols=41  Identities=17%  Similarity=0.110  Sum_probs=34.4

Q ss_pred             CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             355899999998719998999999996299989999999982
Q gi|254780778|r    3 KVSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTK   44 (296)
Q Consensus         3 ~it~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkk   44 (296)
                      .+....|.+|-++ |.+.-.|++||..|+||++.|++||-..
T Consensus        41 ~~~e~~i~~L~eM-GF~~~~a~~AL~~~~~nve~A~~~L~~~   81 (99)
T 1oqy_A           41 SEYETMLTEIMSM-GYERERVVAALRASYNNPHRAVEYLLTG   81 (99)
T ss_dssp             TTHHHHHHHHHTT-TCCSHHHHHHHHHSCSSTTHHHHTTTTS
T ss_pred             CHHHHHHHHHHHH-CCCHHHHHHHHHHHHHCHHHHHHHHHCC
T ss_conf             1577889999850-6377999999998761889999998635