HHsearch results for GI: 254780778 and protein with PDBid: 1vej_A

>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=94.81  E-value=0.047  Score=33.01  Aligned_cols=40  Identities=25%  Similarity=0.234  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             8999999987199989999999962999899999999823
Q gi|254780778|r    6 AVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKG   45 (296)
Q Consensus         6 ~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkkG   45 (296)
                      ...+.+||++==.---.|-+||..++||+++||+||...+
T Consensus        30 ~~QL~~L~~MGF~d~~~N~~AL~~~~Gdv~~Ai~~Ll~~~   69 (74)
T 1vej_A           30 QQELEELKALGFANRDANLQALVATDGDIHAAIEMLLGAS   69 (74)
T ss_dssp             HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHTCC
T ss_pred             HHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
T ss_conf             9999999994899789999999992998999999999658