HHsearch results for GI: 254780778 and protein with PDBid: 1vek_A

>1vek_A UBP14, ubiquitin-specific protease 14, putative; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.5.2.1

Probab=90.75  E-value=0.46  Score=26.38  Aligned_cols=40  Identities=20%  Similarity=0.326  Sum_probs=32.3

Q ss_pred             CCHHHHHHHHHHHCCCHHHHHHHHHHCC-CCHHHHHHHHHHH
Q ss_conf             5589999999871999899999999629-9989999999982
Q gi|254780778|r    4 VSAVAVKELRGKTGAGIMDCKNALLEAK-GDSELAIDILRTK   44 (296)
Q Consensus         4 it~~~iK~LR~~Tgag~~dCKkAL~e~~-gD~e~Ai~~LRkk   44 (296)
                      +....|.+|=++ |-+--.|++||..++ +|++.|++||-..
T Consensus        28 ~d~~~v~~L~~M-GF~~~~a~~AL~~t~n~~~e~A~~Wl~~h   68 (84)
T 1vek_A           28 ANEEIVAQLVSM-GFSQLHCQKAAINTSNAGVEEAMNWLLSH   68 (84)
T ss_dssp             CCHHHHHHHHHH-TCCHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHC-CCCHHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             999999999995-99999999999998699999999999987