HHSEARCH alignment of GI: 254780778 and SCOP domain: d1efub2

Alignment
>d1efub2 d.43.1.1 (B:140-282) Elongation factor Ts (EF-Ts), dimerisation domain {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=2.7e-41  Score=292.67  Aligned_cols=123  Identities=39%  Similarity=0.598  Sum_probs=116.7

Q ss_pred             CEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             00000135323460344344430354321578999885655667654332045878362777766566677631257867
Q gi|254780778|r  152 VISSYLHASPSEGLGSIGVLVALQSSAEDKELLSAIGEKIAVHVMLASPSVISVQMLDPSIVANKRAHYMTEALDSGKSG  231 (296)
Q Consensus       152 ~v~~Y~H~~~~~~~GkigvlV~l~~~~~~~~~~~~~ak~iAmhiaA~~P~~l~~~~v~~~~i~~Ek~i~~~~~~~~gKp~  231 (296)
                      ++++|+|+      |||||||++++.++      +++|+||||||||+|.||++++||++++++|++|+.++++.+|||+
T Consensus         2 vi~sYiH~------gkigvlV~~~~~~~------e~ak~iAMHIAA~~P~~l~~~~vp~~~i~kE~~i~~~q~~~~gKPe   69 (143)
T d1efub2           2 VLGSYQHG------ARIGVLVAAKGADE------ELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPK   69 (143)
T ss_dssp             EEEEEEET------TTEEEEEEEESCCH------HHHHHHHHHHHHHCCSBSSGGGSCHHHHHHHHHHHHHHHHHTTCCH
T ss_pred             EEEEEECC------CEEEEEEEECCCCH------HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH
T ss_conf             18997649------98999999658609------9999888898536875035443889999877777676653024318


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEEECCC
Q ss_conf             8997774016766642333025600027774399999877642079828998898762241
Q gi|254780778|r  232 NIVEKIVNGKMQSFCKECVLLHQGFVVDPSKTVSDFLKESEKSIGASIEVVGVSHFVVGKE  292 (296)
Q Consensus       232 ~i~ekIv~Gkl~Kf~~E~~LleQ~fv~D~~~tV~~~l~e~~k~~g~~i~I~~F~R~~lGE~  292 (296)
                      +|++||++|||+|||+|+|||+|+||+||++||++||++.      +++|++|+||+|||-
T Consensus        70 ~i~eKIveGkl~Kf~~E~~LleQ~fv~D~~~tV~~~l~~~------~~~v~~FvRfevGEG  124 (143)
T d1efub2          70 EIAEKMVEGRMKKFTGEVSLTGQPFVMEPSKTVGQLLKEH------NAEVTGFIRFEVGEG  124 (143)
T ss_dssp             HHHHHHHHHHHHHHHHHHBTTTSEETTEEEEEHHHHHHTT------TCEEEEEEEEETTTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHC------CCEEEEEEEEEECCC
T ss_conf             7898888888998887630014521059860599999867------988988999994696


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: EF-Ts domain-like
superfamily: Elongation factor Ts (EF-Ts), dimerisation domain
family: Elongation factor Ts (EF-Ts), dimerisation domain
domain: Elongation factor Ts (EF-Ts), dimerisation domain
species: Escherichia coli [TaxId: 562]