HHSEARCH alignment of GI: 254780778 and SCOP domain: d1efub4

Alignment

Probab=96.61  E-value=0.0011  Score=42.33  Aligned_cols=80  Identities=15%  Similarity=0.261  Sum_probs=62.1

Q ss_pred             CCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHH
Q ss_conf             222100000135323460344344430354321---57899988565566765433204587836277776656667763
Q gi|254780778|r  148 VSEGVISSYLHASPSEGLGSIGVLVALQSSAED---KELLSAIGEKIAVHVMLASPSVISVQMLDPSIVANKRAHYMTEA  224 (296)
Q Consensus       148 ~~~~~v~~Y~H~~~~~~~GkigvlV~l~~~~~~---~~~~~~~ak~iAmhiaA~~P~~l~~~~v~~~~i~~Ek~i~~~~~  224 (296)
                      +.+|.++.|+++       +.|+||++.+.++-   .+.+++|+++|+.|+.+.+|..+..                   
T Consensus         2 A~EG~I~~~~~~-------~~~~ivEvncETDFVAkne~F~~l~~~i~~~~~~~~~~~~~~-------------------   55 (85)
T d1efub4           2 AADGVIKTKIDG-------NYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEV-------------------   55 (85)
T ss_dssp             CCEEEEEEEEET-------TEEEEEEEEESCHHHHTCHHHHHHHHHHHHHHHHTTCCCHHH-------------------
T ss_pred             CCCEEEEEEECC-------CEEEEEEEECCCCCHHCCHHHHHHHHHHHHHHHHCCCCCHHH-------------------
T ss_conf             666089999769-------869999995467303224679999999999998659645888-------------------


Q ss_pred             HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
Q ss_conf             1257867899777401676664233302560002777439999987764207982899889876
Q gi|254780778|r  225 LDSGKSGNIVEKIVNGKMQSFCKECVLLHQGFVVDPSKTVSDFLKESEKSIGASIEVVGVSHFV  288 (296)
Q Consensus       225 ~~~gKp~~i~ekIv~Gkl~Kf~~E~~LleQ~fv~D~~~tV~~~l~e~~k~~g~~i~I~~F~R~~  288 (296)
                                                 +        ..||.+++.+.-.++|.+|.|.+|.+++
T Consensus        56 ---------------------------~--------~~~v~e~~~~~iakiGEnI~irR~~~~e   84 (85)
T d1efub4          56 ---------------------------L--------KAQFEEERVALVAKIGENINIRRVAALE   84 (85)
T ss_dssp             ---------------------------H--------HHHHHHHHHHHHHHHCSCCEEEEEEEEE
T ss_pred             ---------------------------H--------HCHHHHHHHHHHHHHCCCEEEEEEEEEE
T ss_conf             ---------------------------7--------0637899999988736898986789856

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: EF-Ts domain-like
superfamily: Elongation factor Ts (EF-Ts), dimerisation domain
family: Elongation factor Ts (EF-Ts), dimerisation domain
domain: Elongation factor Ts (EF-Ts), dimerisation domain
species: Escherichia coli [TaxId: 562]