HHSEARCH alignment of GI: 254780778 and SCOP domain: d1wgna_

Alignment

Probab=95.27  E-value=0.011  Score=35.64  Aligned_cols=38  Identities=16%  Similarity=0.100  Sum_probs=31.1

Q ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf             899999998719998999999996299989999999982
Q gi|254780778|r    6 AVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTK   44 (296)
Q Consensus         6 ~~~iK~LR~~Tgag~~dCKkAL~e~~gD~e~Ai~~LRkk   44 (296)
                      .+.|.+|-++ |-+-..|++||..|+||+|.|++||-..
T Consensus        20 e~~v~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Lls~   57 (63)
T d1wgna_          20 RQCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAH   57 (63)
T ss_dssp             HHHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHC-CCCHHHHHHHHHHCCCCHHHHHHHHHHC
T ss_conf             9999999986-9989999999999099999999999928

SCOP domain information

class: All alpha proteins
fold: RuvA C-terminal domain-like
superfamily: UBA-like
family: UBA domain
domain: Ubiquitin-associated protein 1, UBAP1
species: Human (Homo sapiens) [TaxId: 9606]