RPSBLAST alignment of GI: 254780778 and protein with PDBid: 3agp

>3agp_A Elongation factor TS, elongation factor TU, linke replicase; RNA polymerase, translation, transferase; 2.80A {Escherichia coli O157} PDB: 3agq_A Length = 1289

 Score =  282 bits (724), Expect = 5e-77
 Identities = 105/299 (35%), Positives = 152/299 (50%), Gaps = 32/299 (10%)

Query: 1   MSKVSAVAVKELRGKTGAGIMDCKNALLEAKGDSELAIDILRTKGAMAASKREGRKVSEG 60
           M++++A  VKELR +TGAG+MDCK AL EA GD ELAI+ +R  GA+ A+K+ G   ++G
Sbjct: 1   MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGNVAADG 60

Query: 61  LIGIARDGYKKASIVEVNVETDSLAKNTDFQSLVSNIAGIALSTDGSLDNVLAMPFDHSG 120
           +I    DG     I+EVN +TD +AK+  FQ+    +   A++   +   VL        
Sbjct: 61  VIKTKIDG-NYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVEVLKA------ 113

Query: 121 ITVGDGIKQQIAITGECIKLRRSALLCVSEGVISSYLHASPSEGLGSIGVLVALQSSAED 180
               +     +A  GE I +RR A   +   V+ SY H         IGVLVA + + E+
Sbjct: 114 -QFEEERVALVAKIGENINIRRVAA--LEGDVLGSYQHG------ARIGVLVAAKGADEE 164

Query: 181 KELLSAIGEKIAVHVMLASPSVISVQMLDPSIVANKRAHYMTEALDSGKSGNIVEKIVNG 240
                 + + IA+HV  + P  I  + +   +V  +    +  A+ SGK   I EK+V G
Sbjct: 165 ------LVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG 218

Query: 241 KMQSFCKECVLLHQGFVVDPSKTVSDFLKESEKSIGASIEVVGVSHFVVG----KENDD 295
           +M+ F  E  L  Q FV++PSKTV   LKE       + EV G   F VG    K   D
Sbjct: 219 RMKKFTGEVSLTGQPFVMEPSKTVGQLLKE------HNAEVTGFIRFEVGEGIEKVETD 271