HHsearch alignment for GI: 254780779 and conserved domain: PRK04020
>PRK04020 rps2P 30S ribosomal protein S2; Provisional.
Probab=100.00 E-value=0 Score=467.32 Aligned_cols=183 Identities=25% Similarity=0.397 Sum_probs=167.0
Q ss_pred CCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC-CEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Q ss_conf 2458999860886075477657885621020018-816753899999999999999986107881699607823579999
Q gi|254780779|r 5 QFTIRQLLESGVQFGHRNFLWNPKMERYIFCERN-NTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVM 83 (278)
Q Consensus 5 ~~t~~~Ll~ag~H~Gh~~~~wnPkM~~yI~g~rn-gihIIdL~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~i~ 83 (278)
T Consensus 9 lvsi~~ll~AgvHfG--t~~~np~M~~yIy~~R~~GihIIDL~kT~~~L~~A~~~l~~~--~~~~ILfVgtk~qa~~~v~ 84 (204)
T PRK04020 9 LVPLEEYLAAGVHIG--TQQKTKDMEKFIYRVRPDGLYVLDVRKTDERIRIAAKFLSRY--EPEKILVVSSRQYGQKPVK 84 (204)
T ss_pred EEEHHHHHHCCEEEC--CCCCCCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHHHHC--CCCEEEEEECCHHHHHHHH
T ss_conf 588999986095657--776998723221476899758973999999999999999960--7984999979899999999
Q ss_pred HHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 99863398314233458732342666555677899887630121267746788766556777643443322113595799
Q gi|254780779|r 84 EAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMF 163 (278)
Q Consensus 84 ~~A~~~~~~yV~~RWlGG~LTN~~ti~~si~~l~~l~~~~~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~ii 163 (278)
T Consensus 85 ~~A~~~g~~yv~~RWlgG~LTN~~--------l~-----------~~------------------~--------ePdlli 119 (204)
T PRK04020 85 KFAEVVGAKAITGRFIPGTLTNPS--------LK-----------GY------------------I--------EPDVLV 119 (204)
T ss_pred HHHHHHCCEEECCCCCCCCCCCHH--------HC-----------CC------------------C--------CCCEEE
T ss_conf 999996990682622798656831--------30-----------25------------------6--------899899
Q ss_pred EECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 9438877123212343398145403677670011520321577268999999999999999999744310111
Q gi|254780779|r 164 VVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGAD 236 (278)
Q Consensus 164 v~d~~~e~~Av~EA~kl~IPvIaivDTn~dp~~idypIP~NDds~~si~l~~~~i~~ai~~g~~~~~~~~~~~ 236 (278)
T Consensus 120 V~Dp~~e~~AV~EA~~l~IPvIaivDTn~dp~~Vdy~IP~NDds~~SI~Li~~lLa~ail~~kg~~~~~~~~~ 192 (204)
T PRK04020 120 VTDPRGDAQAVKEAIEIGIPVVALCDTDNLTSNVDLVIPTNNKGRKALALIYWLLAREILRERGEIKPDEDLP 192 (204)
T ss_pred EECCCCCHHHHHHHHHCCCCEEEEECCCCCCHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 9788630489999987699989982799891115736516883073899999999999999739777666887