HHsearch alignment for GI: 254780779 and conserved domain: cd05007
>cd05007 SIS_Etherase N-acetylmuramic acid 6-phosphate etherase. Members of this family contain the SIS (Sugar ISomerase) domain. The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. The bacterial cell wall sugar N-acetylmuramic acid carries a unique D-lactyl ether substituent at the C3 position. The etherase catalyzes the cleavage of the lactyl ether bond of N-acetylmuramic acid 6-phosphate.
Probab=92.01 E-value=1.2 Score=25.23 Aligned_cols=156 Identities=14% Similarity=0.262 Sum_probs=96.0
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEECCCCCCCCCCCC-HHHHHHHHHHHHHHHHHH
Q ss_conf 8999999999999999861078816996078235799999986339831423345873234-266655567789988763
Q gi|254780779|r 45 LSQTVPMLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCVNSKWLGGMMTN-WKTVSQSIQKLRDLEELL 123 (278)
Q Consensus 45 L~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~i~~~A~~~~~~yV~~RWlGG~LTN-~~ti~~si~~l~~l~~~~ 123 (278)
T Consensus 28 v~~~lp~I~~~i~~~~~~l~~gGRl~Y~GAGTSGrlgvlDa~E~~PTFg~~~~~v~gliAGG~~al~~~~E~aED~~~-- 105 (257)
T cd05007 28 VEAALPQIARAVDAAAERLRAGGRLIYVGAGTSGRLGVLDASELPPTFGTPPERVVGLIAGGEPALTRAVEGAEDDEE-- 105 (257)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHEEEEECCHHHHHHCHHCCCCCHH--
T ss_conf 999899999999999999965982899878605889998899739877999899110243889999645311256689--
Q ss_pred HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC----CCCHHHHHHHHCCCEEEEECCCCCCC--HHC
Q ss_conf 012126774678876655677764344332211359579994388----77123212343398145403677670--011
Q gi|254780779|r 124 NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTN----REKLAIQEARRLRIPIVAVVDTNSNP--DLV 197 (278)
Q Consensus 124 ~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~iiv~d~~----~e~~Av~EA~kl~IPvIaivDTn~dp--~~i 197 (278)
T Consensus 106 -~g~~------------dl~~~-----~~----~~~DvVIgIsaSG~TPyv~~aL~~A~~~ga~ti~I~~n~~s~~~~~a 163 (257)
T cd05007 106 -AGAA------------DLQAI-----NL----TERDVVIGIAASGRTPYVLGALRYARARGALTIGIACNPGSPLLQLA 163 (257)
T ss_pred -HHHH------------HHHHC-----CC----CCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCC
T ss_conf -9999------------99980-----89----96458999946999859999999999869957876438863100027
Q ss_pred CCEEEECCC-----------CHHHHHHHHHHHHHHHHH
Q ss_conf 520321577-----------268999999999999999
Q gi|254780779|r 198 DYVIPGNDD-----------SSRSIALFCDLVASAAID 224 (278)
Q Consensus 198 dypIP~NDd-----------s~~si~l~~~~i~~ai~~ 224 (278)
T Consensus 164 d~~I~~~tGpEvi~GSTRmkaGTaqK~iLNmiST~~mi 201 (257)
T cd05007 164 DIAIALITGPEVVAGSTRLKAGTAQKLALNMLSTAVMI 201 (257)
T ss_pred CEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 84687268850022354202257899999998899999