HHsearch alignment for GI: 254780779 and conserved domain: pfam04007
>pfam04007 DUF354 Protein of unknown function (DUF354). Members of this family are around 350 amino acids in length. They are found in archaebacteria and have no known function.
Probab=91.77 E-value=1.2 Score=25.06 Aligned_cols=102 Identities=19% Similarity=0.209 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99999999998610788169960782357999999863398314-23345873234266655567789988763012126
Q gi|254780779|r 51 MLQKALQVISDTVARGGRILFVATKSQASDCVMEAAKRSAQYCV-NSKWLGGMMTNWKTVSQSIQKLRDLEELLNKENQG 129 (278)
Q Consensus 51 ~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~i~~~A~~~~~~yV-~~RWlGG~LTN~~ti~~si~~l~~l~~~~~~~~~~ 129 (278)
T Consensus 12 hvhfFk~iI~eL~k~GheV~iTaR~~---~~~~~LL~~y~i~~~~iG~~-g~s~~~--Kl~~~~~R~~~L~~-------- 77 (335)
T pfam04007 12 HVHFFKPIISELEKEGYEVLLTCRKF---GELPELLRSLGFQVKSIGKH-GATLIK--KLLSSAERVYLLTK-------- 77 (335)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEECC---CHHHHHHHHCCCCEEEECCC-CCCHHH--HHHHHHHHHHHHHH--------
T ss_conf 88889999999986898899999613---51999999769976997588-888899--99999999999999--------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCC
Q ss_conf 774678876655677764344332211359579994388771232123433981454036776
Q gi|254780779|r 130 FTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNREKLAIQEARRLRIPIVAVVDTNS 192 (278)
Q Consensus 130 ~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~iiv~d~~~e~~Av~EA~kl~IPvIaivDTn~ 192 (278)
T Consensus 78 ------------------~~~-----~~~PDv~is~~S~~---a~~va~~LgipsI~f~Dteh 114 (335)
T pfam04007 78 ------------------LIP-----EKKPDVAIMKNSME---LPRVAFGLRIPSIIVLDNEH 114 (335)
T ss_pred ------------------HHH-----HHCCCEEEECCCHH---HHHHHHHCCCCEEEEECCHH
T ss_conf ------------------988-----62997899448801---99999882998799947755