HHsearch alignment of GI: 254780779 and MMDB domain: 1m3s_A_
>1m3s_A (A:) Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis}
Probab=92.76 E-value=0.82 Score=25.83 Aligned_cols=110 Identities=10% Similarity=0.049 Sum_probs=62.2
Q ss_pred CHHHHHHHH-HHHHHHHHHHHCCCCEEEEEECCHHH--HHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 389999999-99999999861078816996078235--799999986339831423345873234266655567789988
Q gi|254780779|r 44 DLSQTVPML-QKALQVISDTVARGGRILFVATKSQA--SDCVMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLE 120 (278)
Q Consensus 44 dL~kT~~~L-~~A~~~i~~i~~~gg~ILFVgTk~~~--~~~i~~~A~~~~~~yV~~RWlGG~LTN~~ti~~si~~l~~l~ 120 (278)
.+++|...+ .....-+.+...+.++|.|+|..... .......-.+.|.+-+...=....
T Consensus 14 ~l~~t~~~~~~~~~~~i~~~i~~a~~I~~~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~------------------ 75 (186)
T 1m3s_A 14 ELHNSAAYISNEEADQLADHILSSHQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVGEILTP------------------ 75 (186)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHCSCEEEECSHHHHHHHHHHHHHHHHTTCCEEETTSTTCC------------------
T ss_pred HHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHCC------------------
T ss_conf 99999986599999999999974995999978789999999999998509986777721135------------------
Q ss_pred HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC----CHHHHHHHHCCCEEEEECCCCCCC--
Q ss_conf 76301212677467887665567776434433221135957999438877----123212343398145403677670--
Q gi|254780779|r 121 ELLNKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPDLMFVVDTNRE----KLAIQEARRLRIPIVAVVDTNSNP-- 194 (278)
Q Consensus 121 ~~~~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~~iiv~d~~~e----~~Av~EA~kl~IPvIaivDTn~dp-- 194 (278)
+...-|++|++....+ ..+++.|+..|+|+|+|.+...+|
T Consensus 76 ----------------------------------~~~~~~~vI~iS~sG~t~~~~~~~~~ak~~g~~ii~IT~~~~s~l~ 121 (186)
T 1m3s_A 76 ----------------------------------PLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIG 121 (186)
T ss_dssp ----------------------------------CCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHH
T ss_pred ----------------------------------CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHH
T ss_conf ----------------------------------6889988999818998646789999999869969999899999789
Q ss_pred HHCCCEEEECC
Q ss_conf 01152032157
Q gi|254780779|r 195 DLVDYVIPGND 205 (278)
Q Consensus 195 ~~idypIP~ND 205 (278)
...|+.++...
T Consensus 122 ~~ad~~l~~~~ 132 (186)
T 1m3s_A 122 KQADLIIRMPG 132 (186)
T ss_dssp HHCSEEEECSC
T ss_pred HHCCEEEEECC
T ss_conf 96999999689