HHsearch alignment of GI: 254780779 and MMDB domain: 2vqe_B_
>2vqe_B (B:) 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus}
Probab=100.00 E-value=0 Score=563.43 Aligned_cols=235 Identities=45% Similarity=0.762 Sum_probs=226.0
Q ss_pred CCC-CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHH
Q ss_conf 662-4589998608860754776578856210200188167538999999999999999861078816996078235799
Q gi|254780779|r 3 LPQ-FTIRQLLESGVQFGHRNFLWNPKMERYIFCERNNTHIIDLSQTVPMLQKALQVISDTVARGGRILFVATKSQASDC 81 (278)
Q Consensus 3 m~~-~t~~~Ll~ag~H~Gh~~~~wnPkM~~yI~g~rngihIIdL~kT~~~L~~A~~~i~~i~~~gg~ILFVgTk~~~~~~ 81 (278)
||. +|+++||++|+||||++++|||+|+|||||.|||+|||||++|+.+|++||.|++.++.+||+||||||+++++++
T Consensus 1 ~~~~v~i~~ll~ag~HiGh~~~~~np~m~~yIyg~rn~~~Iinl~~T~~~L~~A~~~i~~~~~~~~~iLfV~Tk~~~~~~ 80 (256)
T 2vqe_B 1 MPVEITVKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFRFIEDLAMRGGTILFVGTKKQAQDI 80 (256)
T ss_dssp -----CCCSTTCSSTTCCCBSSSCCGGGSTTEEEEETTEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEECCSSSSTTT
T ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHH
T ss_conf 99747799998738756666674698873502356198379859999999999999998874147823676245377799
Q ss_pred HHHHHHHCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 999986339831423345873234266655567789988763-0121267746788766556777643443322113595
Q gi|254780779|r 82 VMEAAKRSAQYCVNSKWLGGMMTNWKTVSQSIQKLRDLEELL-NKENQGFTKKERLNIERKRDKLKRALDGIRDMGGLPD 160 (278)
Q Consensus 82 i~~~A~~~~~~yV~~RWlGG~LTN~~ti~~si~~l~~l~~~~-~~~~~~~tkKe~~~~~r~~~kl~k~lgGi~~m~~lP~ 160 (278)
|.++|.+||++|||+||+|||||||.|+++++.+|+.++... .+.++.++|||.+.+.|++.||+++||||++|.++||
T Consensus 81 v~~~a~~~~~~yvn~rWlgG~LTN~~~i~~~i~~l~~~~~~~~~~~~~~l~kke~~~~~r~~~kl~k~l~Gi~~~~~~Pd 160 (256)
T 2vqe_B 81 VRMEAERAGMPYVNQRWLGGMLTNFKTISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLKRLPD 160 (256)
T ss_dssp TTTTTTSSSCCEECSCCCTTTTTTHHHHHHHHHHHHHHHHHTTSTTSSCSCHHHHTTHHHHHHHHHHHSTTGGGCSSCCS
T ss_pred HHHHHHHHCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 99999994996424654378434320111132104765432136742246588898778888899986300343430464
Q ss_pred EEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCCHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 79994388771232123433981454036776700115203215772689999999999999999997443101111
Q gi|254780779|r 161 LMFVVDTNREKLAIQEARRLRIPIVAVVDTNSNPDLVDYVIPGNDDSSRSIALFCDLVASAAIDGIARQHSYMGADT 237 (278)
Q Consensus 161 ~iiv~d~~~e~~Av~EA~kl~IPvIaivDTn~dp~~idypIP~NDds~~si~l~~~~i~~ai~~g~~~~~~~~~~~~ 237 (278)
+|||+||..|++||+||.+|||||||+|||||||++|||||||||||++||+|+|+++++||++|++.+......+.
T Consensus 161 ~iii~d~~~~~~ai~Ea~~l~IPvi~lvDTn~~p~~idypIP~Ndds~~si~li~~ll~~ai~~g~~~~~~~~~~~~ 237 (256)
T 2vqe_B 161 AIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDDAIRSIQLILSRAVDLIIQARGGVVEPSPSYA 237 (256)
T ss_dssp EEEESCTTTTHHHHHHHHHTTCCCEECCCTTSCGGGCSEECCSCSSCHHHHHHHHHHHHHHHHTTTSCCCCSCTTTT
T ss_pred EEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 69970677318999988852851899721358776566343258850879999999999999998521012363000